Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04502 and BL01418

See Amino acid alignment / Visit BSNT_04502 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:42
# Commandline: needle
#    -asequence dna-align/BSNT_04502___glgC.1.5803.seq
#    -bsequence dna-align/BL01418___glgC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04502___glgC-BL01418___glgC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04502___glgC-BL01418___glgC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04502___glgC
# 2: BL01418___glgC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1196
# Identity:     806/1196 (67.4%)
# Similarity:   806/1196 (67.4%)
# Gaps:         109/1196 ( 9.1%)
# Score: 2509.5
# 
#
#=======================================

BSNT_04502___      1 ATGAAAAAACAATGTGTAGCCATGCTCCTTGCCGGCGGAAAGGGCAGCCG     50
                     ||||||.||||||||||.||.|||||..|.||.|||||.|||||.|||.|
BL01418___glg      1 ATGAAAGAACAATGTGTGGCTATGCTTTTGGCAGGCGGCAAGGGAAGCAG     50

BSNT_04502___     51 TCTCAGCGGATTAACAAAAAATATGGCCAAACCGGCTGTATCTTTCGGGG    100
                     .||.|..|..|||||.|||||..|.||.|||||.||.||..|.||.||.|
BL01418___glg     51 GCTGAATGCCTTAACCAAAAACCTCGCAAAACCCGCCGTTCCATTTGGCG    100

BSNT_04502___    101 GAAAATACAGGATTATTGATTTTACCCTAAGCAACTGTTCTAATTCAGGC    150
                     |.||.|||||.||.||.||||||.||||.||||||||..|.||.||.||.
BL01418___glg    101 GCAAGTACAGAATCATCGATTTTGCCCTCAGCAACTGCGCCAACTCGGGA    150

BSNT_04502___    151 ATAGACA-CA-GTCGGGATTTTAACGCAATATCAGCCGCTTGAACTGAAT    198
                     ||  .|| || |||||..|..|.||.|||||.|||||.|||..|.|.||.
BL01418___glg    151 AT--TCATCATGTCGGTGTGCTGACTCAATACCAGCCTCTTTTATTAAAC    198

BSNT_04502___    199 TCCTATATTGGGATCGGC-AGTGCATGGGACCTGGATAGATATAATGGCG    247
                     ||.|||||.||.|||||| || .|||||||.||.||..|..||.|.||.|
BL01418___glg    199 TCATATATCGGAATCGGCGAG-CCATGGGATCTTGACCGCAATGACGGAG    247

BSNT_04502___    248 GCGTGACGGTTTTACCCCCTTATGCCGAGTCATCAGAAGTCAAATGGTAT    297
                     |.||..|..|||||.||||||||||.||..|.||.|||||.||.|||||.
BL01418___glg    248 GGGTCTCCATTTTATCCCCTTATGCTGAAGCGTCGGAAGTGAAGTGGTAC    297

BSNT_04502___    298 AAAGGGACGGCAAGCGCCATTTATGAAAATCTCAATTATTTGAATCAGTA    347
                     |||||||||||.|||||.|||||||||||.|.|.|||.|||.||..||..
BL01418___glg    298 AAAGGGACGGCTAGCGCGATTTATGAAAACCGCCATTTTTTAAAGGAGCT    347

BSNT_04502___    348 TGATCCTGAGTATGTACTGATTTTATCAGGAGATCACATATACAAAATGG    397
                     |.|.|||||..|||||||.||..|||||||||||||.||.||||||||||
BL01418___glg    348 TCAGCCTGAACATGTACTCATCCTATCAGGAGATCATATCTACAAAATGG    397

BSNT_04502___    398 ACTACGGCAAAATGCTTGATTATCACATTGAAAAGAAAGCAGATGTGACC    447
                     |||||||.||||||||.||.||.|||...||.||..||||.||.|..|||
BL01418___glg    398 ACTACGGAAAAATGCTCGAATACCACGCGGAGAAACAAGCTGACGCCACC    447

BSNT_04502___    448 ATCTCTGTCATCGAAGTGGGCTGGGAGGAAGCAAGCCGATTCGGCATC--    495
                     |||.|.|||||.|||||..||||||..|||||..||||.|||||||||  
BL01418___glg    448 ATCGCAGTCATTGAAGTCAGCTGGGCAGAAGCCGGCCGTTTCGGCATCCT    497

BSNT_04502___    496 ----ATGAAGGCCAATCCAGATGGGACGATCACACATTTTGATGAAAAGC    541
                         |.|||.|.||    ||||||  .|||.|||...||.||.|||||||
BL01418___glg    498 TCATACGAATGACA----AGATGG--AGATTACAAGCTTCGAGGAAAAGC    541

BSNT_04502___    542 CCAAATTCCCTAAGAGCAATCTTGCCTCAATGGGAATTTATATATTCAAT    591
                     |.||||..||.|||||||||.|.||.||||||||..|.||..|.||.||.
BL01418___glg    542 CGAAATATCCAAAGAGCAATTTGGCATCAATGGGTGTCTACGTTTTTAAA    591

BSNT_04502___    592 TGGCCGCTT--TTGAA-ACAGTATCTTGAGATGGA---CGATCAAAACCC    635
                     ||| .||.|  ||||| |        ||.|.||||   ||||.||||...
BL01418___glg    592 TGG-AGCGTGCTTGAAGA--------TGCGTTGGAACGCGATGAAAAAAA    632

BSNT_04502___    636 TT---ATTCTAGCCACGACTTCGGCAAAGACATTATTCC-TCTGCTTTTG    681
                     ||   ..||.||||||||.|||||.|||||..|.||||| .|| |||.|.
BL01418___glg    633 TTCCGCGTCAAGCCACGATTTCGGAAAAGATGTCATTCCGGCT-CTTCTC    681

BSNT_04502___    682 GAGGAGAAAAAGAAGCTTTCTGCTTATCCGTTCAAGGGATATTGGAAGGA    731
                     ||.||.||.||||.|||....|||||||||||.||.|||||.||||||||
BL01418___glg    682 GAAGAAAATAAGAGGCTGAACGCTTATCCGTTTAAAGGATACTGGAAGGA    731

BSNT_04502___    732 TGTCGGAACGGTGCAG-AGCTTGTGGGAAGCCAATATGGATTTGTTAAAA    780
                     ||||||.||||| ||| ||.||.||||||||||||||||||.||.|...|
BL01418___glg    732 TGTCGGTACGGT-CAGAAGTTTATGGGAAGCCAATATGGATCTGCTTGGA    780

BSNT_04502___    781 GAGGA--CTCGGAGCTGAAGCTGTTTGAACGCAAATGGAAAATTTACTCC    828
                     ||..|  |||  .|||..|.|||||.|||||.||.|||...|||||.||.
BL01418___glg    781 GATCATCCTC--CGCTTGACCTGTTCGAACGGAACTGGCGGATTTATTCA    828

BSNT_04502___    829 GTCAATCCAAATCAGCCTCCGCAATTTATTTC--ATCTGATGCGCAGGTT    876
                     |||...||.||||..||.|||||.|||.||.|  |||||  |||.|..|.
BL01418___glg    829 GTCTCCCCGAATCTCCCGCCGCAGTTTGTTGCCGATCTG--GCGGAAATC    876

BSNT_04502___    877 CAAGATTCGCTTGTGAACGAAGGTTGTGTTGTATATGGAAATGTGTC--T    924
                     .||||.|||||.||.|.||||||.||....||.|||||      |||  |
BL01418___glg    877 AAAGAATCGCTCGTCAGCGAAGGATGCACCGTGTATGG------GTCGGT    920

BSNT_04502___    925 CACTCCGTTC-----TTTTTCAAGGTGTGACTGTCGGTAAGCATACGACT    969
                     ||| ||||||     |.|||||..|.||..|..||||.|..|||.|..| 
BL01418___glg    921 CAC-CCGTTCGGTTATATTTCAGCGCGTTGCCATCGGCAGACATTCCGC-    968

BSNT_04502___    970 GTTACATCA-----TCCGTCATAATGCCGGATGTGACGATTGGGGAGCAT   1014
                         |||||     ||.|||.|.||||..||.||..|.|||||.|||.||
BL01418___glg    969 ----CATCAAACGTTCAGTCGTGATGCATGACGTTTCAATTGGAGAGTAT   1014

BSNT_04502___   1015 GTAGTCATTGAAAATGCCATCGTTCCTAATGGGATGG--TGC---TGCCG   1059
                     ||.|..||.|||||||||||.||     ||.||..||  |.|   |.|||
BL01418___glg   1015 GTTGAGATCGAAAATGCCATTGT-----ATCGGCAGGAATTCGAATTCCG   1059

BSNT_04502___   1060 GATG--------GCGCAGTGATTCGCTCCGAAAAAGACATTGAAGAGGTG   1101
                     ||.|        |||.||         |||.||.|     ||..||.||.
BL01418___glg   1060 GACGGTTTTTGCGCGAAG---------CCGGAAGA-----TGGCGAAGTC   1095

BSNT_04502___   1102 CTGCTCGTTTCAGAGGAATTTGTAGAAAAAGA----ATTGATTTAA   1143
                     |||||..|..|||||||.|.|||..|||||.|    .||| |||||
BL01418___glg   1096 CTGCTGATCACAGAGGAGTATGTCAAAAAACATAAGGTTG-TTTAA   1140


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