Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03204 and BL01436

See Amino acid alignment / Visit BSNT_03204 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:52
# Commandline: needle
#    -asequence dna-align/BSNT_03204___yodL.1.5803.seq
#    -bsequence dna-align/BL01436___yodL.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03204___yodL-BL01436___yodL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03204___yodL-BL01436___yodL.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03204___yodL
# 2: BL01436___yodL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 327
# Identity:     222/327 (67.9%)
# Similarity:   222/327 (67.9%)
# Gaps:          21/327 ( 6.4%)
# Score: 682.5
# 
#
#=======================================

BSNT_03204___      1 ---------ATGTT--ATCCGTGTTTAAAAAGAAGTCTTGTTCC-TATGA     38
                              |||||  |.|  ||||||||||.||| ||..|.|| |||||
BL01436___yod      1 TTGCCGTTAATGTTTCAAC--TGTTTAAAAAAAAG-CTGATACCTTATGA     47

BSNT_03204___     39 CGTGACAATATTTCAGACACCCCGGTTTGGCGAAAAAAAGGGCTAC-AGA     87
                     .|||||.||.|||||.||.||..|.|||||.|||.|.|||||.||| |||
BL01436___yod     48 TGTGACGATTTTTCAAACGCCTTGCTTTGGTGAAGATAAGGGATACGAGA     97

BSNT_03204___     88 -GCCGTCTATCGAACTGAACTGAACGGGAGCGATCATCAAGACGTGCTGA    136
                      |  ||.||..||||.|||.|.|||||.||....|||.||||.||||||.
BL01436___yod     98 TG--GTTTACAGAACGGAAATAAACGGCAGAACCCATGAAGATGTGCTGG    145

BSNT_03204___    137 AAAGAGCATTCTCTTTGTTTAATGTATTCGACACTGTTCCGAGTGATTAT    186
                     ||.|..|.||.||....||.|||||.|..|||||.||.||||.|||||||
BL01436___yod    146 AACGGACGTTTTCCACTTTCAATGTTTATGACACGGTGCCGAATGATTAT    195

BSNT_03204___    187 GATGCAAGATTTATGGCCACAGGGGACGTGATCCTGATTGATGAAGGCAG    236
                     .|.||.||||||.|.||.||.||.|||.|..|..|.||.||||||||.||
BL01436___yod    196 AAGGCGAGATTTCTTGCAACTGGCGACATCGTTTTAATCGATGAAGGAAG    245

BSNT_03204___    237 AAAAGGGAAAACATATTATCAACTGCTTCCCGCCGGCTGGAGGAAAATCA    286
                     |||.||.|||||.||||||.|||||||..|..|.||.|||||.|||||||
BL01436___yod    246 AAAGGGAAAAACCTATTATAAACTGCTGTCTACGGGGTGGAGCAAAATCA    295

BSNT_03204___    287 ATCGTCTGATTG-TACAAACGACATAA    312
                     |.|| |...||| |.||..|..|.|||
BL01436___yod    296 ACCG-CATTTTGCTGCAGTCTTCGTAA    321


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