Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_03200 and BL01437

See Amino acid alignment / Visit BSNT_03200 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:52
# Commandline: needle
#    -asequence dna-align/BSNT_03200___deoD.1.5803.seq
#    -bsequence dna-align/BL01437___deoD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03200___deoD-BL01437___deoD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03200___deoD-BL01437___deoD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03200___deoD
# 2: BL01437___deoD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 721
# Identity:     518/721 (71.8%)
# Similarity:   518/721 (71.8%)
# Gaps:          41/721 ( 5.7%)
# Score: 1839.0
# 
#
#=======================================

BSNT_03200___      1 ATGAGTGTACATATAGGTGCTGAAAAAGGACAAATTGCGGATACAGTGCT     50
                     |||||.||||||||.||.||.|||||||||||||||||.||.||.|||||
BL01437___deo      1 ATGAGCGTACATATTGGCGCAGAAAAAGGACAAATTGCAGAAACGGTGCT     50

BSNT_03200___     51 TTTGCCGGGAGATCCTCTCAGAGCAAAATTTATTGCAGAAACGTATCTTG    100
                     ..|.||.|||||.||.||..|.|||||||.|||.||.||.||.|||.|.|
BL01437___deo     51 GCTTCCAGGAGACCCGCTGCGCGCAAAATATATCGCTGATACATATTTGG    100

BSNT_03200___    101 AAAATGTAGAATGCTACAATGAAGTCAGAGGCATGTATGGATTTACGGGT    150
                     ||||.||.|||||.||.||.|||||..|.||.|||||.||.|||||.||.
BL01437___deo    101 AAAACGTTGAATGTTATAACGAAGTACGGGGAATGTACGGGTTTACCGGC    150

BSNT_03200___    151 ACATATAAAGGTAAAAAAA-----TCTCAGTACAAGGCACGGGAATGGGT    195
                     ||.||||||||     |||     |.||.||.||.||.|||||.||||||
BL01437___deo    151 ACTTATAAAGG-----AAAGCGCGTTTCCGTTCAGGGGACGGGCATGGGT    195

BSNT_03200___    196 GTTCCGTCTATTTCAATTTATGTGAATGAATTAATTCA-AAGCTTCGATG    244
                     ||.||||||||||||||||||||.||||||.|.| ||| |||||..||||
BL01437___deo    196 GTGCCGTCTATTTCAATTTATGTCAATGAACTGA-TCAGAAGCTATGATG    244

BSNT_03200___    245 TGCAAAATCTAATAAGAGTCGGTTCTTGCGGCGCTATTCGTAAAGATGTC    294
                     ||.||||.||.||..|.|||||.||.|||||.||.||..|.|||||.|||
BL01437___deo    245 TGAAAAACCTGATCCGCGTCGGATCGTGCGGTGCGATCAGAAAAGACGTC    294

BSNT_03200___    295 AAAGTGCGAGACGTCATTTTGGCGATGACCTCCTCAACTGATTCACAAAT    344
                     ||.||..||||.||||||.|.||||||||.||.|||||||||||||||||
BL01437___deo    295 AATGTAAGAGATGTCATTCTTGCGATGACTTCATCAACTGATTCACAAAT    344

BSNT_03200___    345 GAACAGAGTCGCTTTTGGAAGCATTGATTTTGCGCCTTGCGCAGATTTCG    394
                     .||||||||.||.||.||....||.||.||||||||.|||||.||.||||
BL01437___deo    345 CAACAGAGTGGCATTCGGCTCGATCGACTTTGCGCCCTGCGCGGACTTCG    394

BSNT_03200___    395 AGCTTTTAAAAAATGCCTATGATGCCGCAAAGGATAAAGGTG--------    436
                     ..||..|||||..|||.|||||.||.||||         |||        
BL01437___deo    395 GCCTGCTAAAAGCTGCTTATGACGCTGCAA---------GTGAGCGGAAC    435

BSNT_03200___    437 -TGCCGGTGACTGTAGGAAGCGTATTTACAGCTGACCAGTTCTACAACGA    485
                      |.|||||.||.|.|||.|..||.|||||.||.||.||.|||||.|||||
BL01437___deo    436 ATCCCGGTTACGGCAGGGAATGTGTTTACGGCGGATCAATTCTATAACGA    485

BSNT_03200___    486 CGATTCGCAAATTGAAAAACTTGCAAAATACGGTGTGCTTGGCGTTGAAA    535
                     |||....||||||||.||.|||||.|||.||||.|||||||..||.||.|
BL01437___deo    486 CGACAGCCAAATTGAGAAGCTTGCCAAACACGGAGTGCTTGCGGTCGAGA    535

BSNT_03200___    536 TGGAAACAACTGCATTGTATACATTAGCAGCGAAGCACGGAAGAAAAGCC    585
                     |||||||.||.||..|.||||||||.||.|||||...|||..||||||||
BL01437___deo    536 TGGAAACGACGGCGCTTTATACATTGGCTGCGAAATTCGGCCGAAAAGCC    585

BSNT_03200___    586 CTGTCAATTCTCACCGTGAGTGATCACGT-ATTAACAGGAGAAGAAACGA    634
                     ||.||.|||.|.||.||.||.|||||||| ||| ||.||.||.|||||.|
BL01437___deo    586 CTCTCCATTTTAACGGTCAGCGATCACGTCATT-ACCGGCGAGGAAACAA    634

BSNT_03200___    635 CAGCGGAAGAGCGTCAAACGACATTTCATGATATGATAGAAGTGGCTTTA    684
                     |.||.|||||..|.||.|||||.|||.||||||||||.....|||||.|.
BL01437___deo    635 CGGCAGAAGAAAGACAGACGACCTTTAATGATATGATTCTGCTGGCTCTG    684

BSNT_03200___    685 CATTCCG---TATCACAATAA    702
                     .||.|.|   |.|.|      
BL01437___deo    685 GATACTGCTTTGTAA------    699


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.