Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03202 and BL01454

See Amino acid alignment / Visit BSNT_03202 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:52
# Commandline: needle
#    -asequence dna-align/BSNT_03202.1.5803.seq
#    -bsequence dna-align/BL01454.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03202-BL01454.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03202-BL01454.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03202
# 2: BL01454
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 138
# Identity:      89/138 (64.5%)
# Similarity:    89/138 (64.5%)
# Gaps:          18/138 (13.0%)
# Score: 255.0
# 
#
#=======================================

BSNT_03202         1 ATGGGTAAAAAACATCGCAACCGGATCACCGGCCAAAAAAAGAACAATCA     50
                     |||||.||||||||.||.|||.|..|||||||....|||||.|||||.||
BL01454            1 ATGGGCAAAAAACAGCGAAACAGAGTCACCGGATTGAAAAAAAACAACCA     50

BSNT_03202        51 TATACCTGA-AAAAGATATCATTGCAGCTGAAGAAGCACACGGGAAAGAA     99
                     .|| ||.|| |||.||..||||.||.||.||.||.||.||.|..||.|||
BL01454           51 CAT-CCCGACAAAGGACGTCATCGCGGCAGAGGATGCGCATGAAAAGGAA     99

BSNT_03202       100 TATTCTGCTGCC-----------AAACGCAAGCCTTAA    126
                     ||  |.|| |||           |||..|||  |.|||
BL01454          100 TA--CAGC-GCCAGAAAAAGAAAAAATACAA--CATAA    132


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