Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01105 and BL01479

See Amino acid alignment / Visit BSNT_01105 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:37
# Commandline: needle
#    -asequence dna-align/BSNT_01105___purC.1.5803.seq
#    -bsequence dna-align/BL01479___purC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01105___purC-BL01479___purC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01105___purC-BL01479___purC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01105___purC
# 2: BL01479___purC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 730
# Identity:     584/730 (80.0%)
# Similarity:   584/730 (80.0%)
# Gaps:          17/730 ( 2.3%)
# Score: 2330.0
# 
#
#=======================================

BSNT_01105___      1 GTGAATATTGTGAAGAATGAACTTTTATACGAAGGAAAAGCAAAAAAGAT     50
                     ||||||||||||||.||||||||||||||||||||||||||.||||||||
BL01479___pur      1 GTGAATATTGTGAAAAATGAACTTTTATACGAAGGAAAAGCGAAAAAGAT     50

BSNT_01105___     51 CTACAAAACCGATGACGAAAACACGCTGTATGTCGTGTATAAAGACTCCG    100
                     .|||...||.|||||.||.|||||..|||.|||||..||.|||.||||.|
BL01479___pur     51 TTACCGGACGGATGATGACAACACTTTGTTTGTCGAATACAAAAACTCAG    100

BSNT_01105___    101 CCACTGCCTTTAACGGCGAGAAAAAAGCAGAAATCAGCGGGAAAGGGCGC    150
                     |.||.||.||||||||.||.||||||||.||.||...|||.|||||.||.
BL01479___pur    101 CGACGGCTTTTAACGGAGAAAAAAAAGCCGAGATTGACGGAAAAGGCCGT    150

BSNT_01105___    151 TTAAATAACGAGATTTCAAGCTTAATTTTCAAACACCTTCATGGAAAGGG    200
                     |||||||||||.|||||.|||.|.|||||||.|...|||||.|..|||||
BL01479___pur    151 TTAAATAACGAAATTTCCAGCCTGATTTTCACAAGGCTTCACGAGAAGGG    200

BSNT_01105___    201 CATTAACAATCATTTTATCGAGCGCATTTCGGAAACGGAACAGCTCATTA    250
                     .||.|||||.||.|||.|.||.||.|||||.||||||||.||||||||||
BL01479___pur    201 AATCAACAACCACTTTGTTGAACGAATTTCTGAAACGGAGCAGCTCATTA    250

BSNT_01105___    251 AAAAGGTAACGATTGTGCCGCTTGAAGTCGTGGTCAGAAATGTTGTGGCA    300
                     ||||.||.|||||..|.||||||||||||||.|||.|.|||||.||.||.
BL01479___pur    251 AAAAAGTGACGATCATCCCGCTTGAAGTCGTTGTCCGCAATGTCGTTGCC    300

BSNT_01105___    301 GGAAGCATGTCCAAACGTCTCGGCATTCCAGAAGGCACGGAGCTTGAGCA    350
                     |||||||||||||||.|.|||||||||||.||||||||||||||.|.|||
BL01479___pur    301 GGAAGCATGTCCAAAAGGCTCGGCATTCCGGAAGGCACGGAGCTGGGGCA    350

BSNT_01105___    351 GCCGATTATCGAGTTTTACTACAAGGATGACGCGCTGGGTGATCCGCTCA    400
                     ||||||||||||||||||||||||||||||||||||.|||||||||.|.|
BL01479___pur    351 GCCGATTATCGAGTTTTACTACAAGGATGACGCGCTCGGTGATCCGTTGA    400

BSNT_01105___    401 TCACAGAAGATCATATTTGGCTTTTGAAAGCAGC-GACTCCTGAGCAGGT    449
                     ||||||||||.|||||..||.||||.|||||||| || .|||||.|||||
BL01479___pur    401 TCACAGAAGACCATATCCGGATTTTAAAAGCAGCTGA-GCCTGAACAGGT    449

BSNT_01105___    450 --AGAAACCATTAAGTCCATTACAAAAACA-GTAAACGAAGAGCTTCAAA    496
                       |||||  ||.||.||.||||| .|.||| ||||||||||||||.||.|
BL01479___pur    450 GGAGAAA--ATCAAATCGATTAC-GAGACAGGTAAACGAAGAGCTGCAGA    496

BSNT_01105___    497 GCATTTTCGACGATTGTCATGTCAGATTAATAGATTTCAAGCTTGAATTC    546
                     ..|||||||..|.|||..||||||||||.|||||||||||||||||.|||
BL01479___pur    497 CGATTTTCGCGGCTTGCGATGTCAGATTGATAGATTTCAAGCTTGAGTTC    546

BSNT_01105___    547 GGTCTAGATGCAGACGGGCAAGTGCTTTTGGCGGATGAAATTTCACCTGA    596
                     ||.||.|||..||||||..|.||.||..||||.|||||.|||||.||.||
BL01479___pur    547 GGGCTCGATAAAGACGGCGAGGTCCTGCTGGCCGATGAGATTTCCCCGGA    596

BSNT_01105___    597 CACATGCCGCTTGTGGGATAAAGAAACGAACGAAAAGCTGGACAAAGATT    646
                     .||.|||||..||||||||.||||||||||.||||||||.||.||||||.
BL01479___pur    597 TACGTGCCGGCTGTGGGATCAAGAAACGAATGAAAAGCTTGATAAAGATG    646

BSNT_01105___    647 TATTCAGACGCAATCTGGGAAGCTTAACCGACGCATACGAAGAGATTTTC    696
                     |.||||||.|.||||||||..|.||.||.||.|||||||||||.||.|||
BL01479___pur    647 TGTTCAGAAGAAATCTGGGCGGATTGACGGATGCATACGAAGAAATATTC    696

BSNT_01105___    697 AAAAGACTGGGAGGCATTCATCATGTATAA    726
                     ||||||||.|||||       ||||||.  
BL01479___pur    697 AAAAGACTTGGAGG-------CATGTAA--    717


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