Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01116 and BL01487

See Amino acid alignment / Visit BSNT_01116 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:38
# Commandline: needle
#    -asequence dna-align/BSNT_01116___purD.1.5803.seq
#    -bsequence dna-align/BL01487___purD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01116___purD-BL01487___purD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01116___purD-BL01487___purD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01116___purD
# 2: BL01487___purD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1287
# Identity:     974/1287 (75.7%)
# Similarity:   974/1287 (75.7%)
# Gaps:          36/1287 ( 2.8%)
# Score: 3620.5
# 
#
#=======================================

BSNT_01116___      1 GTGAATGTATTAATTATCGGCAAAGGCGGAAGAGAACATACGCTGGCGTG     50
                     |||||.|||||.||||||||||.||||||.||.||.||.|||||.||.||
BL01487___pur      1 GTGAACGTATTGATTATCGGCAGAGGCGGCAGGGAGCACACGCTCGCCTG     50

BSNT_01116___     51 GAAGGCAGCGCAAAGTAGTCTCGTCGAGAATGTATTTGCAGCTCCTGGAA    100
                     |||.||.||||||||...|||.||||..|.|||||.|||.||.||.||.|
BL01487___pur     51 GAAAGCGGCGCAAAGCCCTCTTGTCGGCACTGTATATGCGGCGCCCGGCA    100

BSNT_01116___    101 ATGACGGCATGGAAGCTTCCGCACAGCTTGTAAACATTGAGGAAAGCGAC    150
                     |||||||.||||..|...||||....||.||..|..||||.|||.||.|.
BL01487___pur    101 ATGACGGAATGGCCGGGACCGCCGTACTCGTTGATCTTGACGAAGGCAAT    150

BSNT_01116___    151 CACGCAGGGCTTGTCTCGTTTGCAAAAGAAAACCAGGTCGGCCTAACCAT    200
                     ||||.|||||||.||.|.||.|||||.||||||.|..||||.||.||.||
BL01487___pur    151 CACGAAGGGCTTCTCGCTTTCGCAAAGGAAAACAATATCGGACTGACGAT    200

BSNT_01116___    201 TGTCGGCCCTGAGGTTCCTTTAATTGAAGGTCTGGTGGATGAATTTGAAA    250
                     .|||||.||||||||.||||||||.|||||.||.||.||||.|||||||.
BL01487___pur    201 CGTCGGTCCTGAGGTCCCTTTAATCGAAGGGCTTGTTGATGCATTTGAAG    250

BSNT_01116___    251 AAGCGGGTCTGCGCGTGTTCGGCCCGTCAAAAGCCGCGGCGATCATCGAA    300
                     |||||||.||.|..|||||.||.|||||.|||...||.||..|.||.|||
BL01487___pur    251 AAGCGGGCCTTCCGGTGTTTGGACCGTCGAAAAATGCAGCTGTGATTGAA    300

BSNT_01116___    301 GGAAGCAAACAGTTCGCTAAGGATTTAATGAAGAAATACGACATTCCGAC    350
                     ||||||||.|||||.||.||||||.|.|||||.||||||.|.||||||||
BL01487___pur    301 GGAAGCAAGCAGTTTGCCAAGGATCTTATGAAAAAATACCAGATTCCGAC    350

BSNT_01116___    351 TGCAGAATACGACACGTTTACATCCTTTGATGAGGCGAAGGCATATGTGC    400
                     .|||||||||||.|||||||||||.|||||..|.||.|||||.|||||..
BL01487___pur    351 AGCAGAATACGAAACGTTTACATCTTTTGAAAACGCAAAGGCGTATGTTG    400

BSNT_01116___    401 TGGAAAAAGGTGCTCCGATTGTGATCAAAGCAGATGGACTTGCAGCTGGA    450
                     .|||||||||.|||||.||.||.||.|||||.||.||.|||||.||.|||
BL01487___pur    401 AGGAAAAAGGCGCTCCAATCGTTATTAAAGCCGACGGGCTTGCCGCCGGA    450

BSNT_01116___    451 AAAGGCGTTACTGTGGCTATGACAGAGGAAGAAGCAATTGCA-TGTTTGC    499
                     ||||||||.||.||.||.|||||||..||||||||..|| || |||.|||
BL01487___pur    451 AAAGGCGTCACAGTCGCGATGACAGCCGAAGAAGCGGTT-CAGTGTCTGC    499

BSNT_01116___    500 ATGACTTTCTTGAAGATGAAAAGTTCGGTGATGCGAGCGCGTCCGTTGTC    549
                     ||||||||.|.|||||||||||||||||.||.||.|||||.||.||.|||
BL01487___pur    500 ATGACTTTTTAGAAGATGAAAAGTTCGGCGAAGCAAGCGCATCTGTCGTC    549

BSNT_01116___    550 ATTGAAGAATATCTTTCT----GGTGAAGAATTTTCTCTGATGGCCTTTG    595
                     ||.||.|||    |||.|    ||||||||||||||.||||||||.||||
BL01487___pur    550 ATCGAGGAA----TTTTTGAGCGGTGAAGAATTTTCGCTGATGGCTTTTG    595

BSNT_01116___    596 TCAAAGGGGAAAAAGTGTATCCAATGGTGATTGCCCAGGATCACAAGCGT    645
                     |||||||.||.|||||||||||.|||||||||||.||||||||||||||.
BL01487___pur    596 TCAAAGGTGAGAAAGTGTATCCGATGGTGATTGCACAGGATCACAAGCGG    645

BSNT_01116___    646 GCGTTTGACGGAGACAAAGGCCCGAATACGGGCGGAATGGGCGCTTACTC    695
                     ||.||||||||||||||.|||||||||||.||.|||||||||||.||.||
BL01487___pur    646 GCATTTGACGGAGACAAGGGCCCGAATACAGGGGGAATGGGCGCGTATTC    695

BSNT_01116___    696 TCCAGTTCCGCAAATTTCGGATGAAACGGTC--------CGCCATGCTGT    737
                     |||.||.|||||.||||||||||   |||||        ||||     ||
BL01487___pur    696 TCCGGTGCCGCAGATTTCGGATG---CGGTCGTCGAAGACGCC-----GT    737

BSNT_01116___    738 AGAAACGATCGTGAAGCCGGCCGCAAAAGCAATGGTACAAGAAGGCCGTT    787
                     ..|||||||..||.|||||||.||..||||.|||||..||||||||||||
BL01487___pur    738 TAAAACGATTTTGGAGCCGGCGGCCGAAGCGATGGTTAAAGAAGGCCGTT    787

BSNT_01116___    788 CCTTCACTGGCGTTTTGTACGCTGGATTGATGCTTACTGAAAACGGCTCG    837
                     |.||.||.||.||.|||||.||.||.||.|||||.||.|||||.||..|.
BL01487___pur    788 CGTTTACGGGAGTCTTGTATGCCGGGTTAATGCTGACCGAAAAAGGAACA    837

BSNT_01116___    838 AAGGTCATTGAATTTAATGCCCGTTTCGGCGATCCGGAAACACAGGTCGT    887
                     ||.||.||.|||||.||.||..|.|||||.|||||.|||||.||||||||
BL01487___pur    838 AAAGTGATCGAATTCAACGCGAGATTCGGGGATCCCGAAACCCAGGTCGT    887

BSNT_01116___    888 GCTTCCGCGCATGGAATCTGATCTGGTGCAGGTGCTT-CTTGATCTTTTA    936
                     .||.|||||..|.|||||.||.||.||.||||| ||| .|||||||..|.
BL01487___pur    888 CCTGCCGCGTCTTGAATCAGACCTTGTCCAGGT-CTTGGTTGATCTCCTC    936

BSNT_01116___    937 GATGATAAGGAAGTTGA-CTTAAGATGGAAGGATACCGCGGCAGTGAGTG    985
                     |..||.|..|||||.|| ||.||| |||||||||||.||||||||.|..|
BL01487___pur    937 GCAGACAGAGAAGTGGAGCTGAAG-TGGAAGGATACGGCGGCAGTCACCG    985

BSNT_01116___    986 TTGTGCTTGCATCAGAAGGGTATCCGGAAAGCTACGCAAAAGGCACGCCG   1035
                     ||||.||||||||.||.||.||||||||||||||.|.|||||||.|||||
BL01487___pur    986 TTGTTCTTGCATCTGACGGCTATCCGGAAAGCTATGAAAAAGGCGCGCCG   1035

BSNT_01116___   1036 ATCGGCAGCCTTGCTGCGGAAACTGAGCAGGTCGTGGTCTTCCATGCCGG   1085
                     |||||||..||||...|.||.|..||||||..|||.|||||.||.||.||
BL01487___pur   1036 ATCGGCACGCTTGAGCCTGACATGGAGCAGACCGTCGTCTTTCACGCAGG   1085

BSNT_01116___   1086 AACGAAAGCAGAAGGCGGAG---AGTTTGTTACAAACGGGGGGCGCGTCG   1132
                     .|||||   |.||.||||.|   |||||||.||.|||||.||.|||||||
BL01487___pur   1086 CACGAA---AAAAAGCGGCGATCAGTTTGTGACGAACGGCGGCCGCGTCG   1132

BSNT_01116___   1133 CCAATGTGACAGCTTTTGATGAATCGTTTGAAGCGGCTAGAGACCGAGTG   1182
                     |||||||.||.||.||||..||..|||||||.|||||.||.||...||..
BL01487___pur   1133 CCAATGTCACCGCGTTTGCAGAGACGTTTGATGCGGCAAGGGAAGCAGCC   1182

BSNT_01116___   1183 TACAAAGCGGTTGATGAAATATTCAAACCGGGACTCTTTTTCAGAAAAGA   1232
                     ||..|||||||.|||..|.||...||||||||.||.||||.|.|.|..||
BL01487___pur   1183 TATCAAGCGGTGGATCGAGTAAGAAAACCGGGGCTGTTTTACCGGATGGA   1232

BSNT_01116___   1233 TATTGGGGCACGCGCTTTAAAGGCTGCCCAAAAATAA   1269
                     .||.||..|.||.||..|.|||||.||.||.||||||
BL01487___pur   1233 CATCGGCTCGCGTGCGCTCAAGGCAGCACAGAAATAA   1269


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