Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05566 and BL01495

See Amino acid alignment / Visit BSNT_05566 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:41
# Commandline: needle
#    -asequence dna-align/BSNT_05566___ywoF.1.5803.seq
#    -bsequence dna-align/BL01495___ywoF.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05566___ywoF-BL01495___ywoF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05566___ywoF-BL01495___ywoF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05566___ywoF
# 2: BL01495___ywoF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1410
# Identity:    1133/1410 (80.4%)
# Similarity:  1133/1410 (80.4%)
# Gaps:           6/1410 ( 0.4%)
# Score: 4521.0
# 
#
#=======================================

BSNT_05566___      1 ATGAGAAAATGGTATTTTATTCTTTTGGCGGGTGTTTTAACGTCTGTCAT     50
                     |||||||||||||||||||||.|.|..|||.||.|||||...|||||.||
BL01495___ywo      1 ATGAGAAAATGGTATTTTATTTTATCAGCGTGTATTTTAGTTTCTGTTAT     50

BSNT_05566___     51 CCTCGCTTTCGTTTATGATAAGACAAAAGCGAATGAGGAAGGATCTGGGG    100
                     |.|||||||.|.|||.||||||||...|||.||.||.|.| ||.|.||..
BL01495___ywo     51 CATCGCTTTTGCTTACGATAAGACCGGAGCAAAAGAAGCA-GAACCGGCT     99

BSNT_05566___    101 ATTATC-TGTATGTTTCGCTAAATGGCAGTGATCAAAATGAAGGAACAAA    149
                     |..|.| ||||||||||.|...||||.|.||||||||||||||||||.||
BL01495___ywo    100 AACAGCTTGTATGTTTCCCCCGATGGAAATGATCAAAATGAAGGAACGAA    149

BSNT_05566___    150 AGAAAAACCGTTTCGTACATTGGCACACGCATCTGAGAAGGCTGCTGCCG    199
                     ||||||.||||||||.||..||..|||.|||.|..|.|||||||...|||
BL01495___ywo    150 AGAAAAGCCGTTTCGAACTCTGAAACAGGCAGCAAAAAAGGCTGTCCCCG    199

BSNT_05566___    200 GCACAACTGTCATGATTCGGGAGGGCACGTATCATGAGACCCTTGATGT-    248
                     ||||||||||||||||||||||.||||||||||||||.||.|||||||| 
BL01495___ywo    200 GCACAACTGTCATGATTCGGGAAGGCACGTATCATGAAACGCTTGATGTG    249

BSNT_05566___    249 AAAGCACAGCGGTACGGACGGAAAGCCTATCACATTCCGAAACTATGAAA    298
                     |.|| |.|||||..|||..|.|||||||||||||||.|.|||||||||.|
BL01495___ywo    250 AGAG-AGAGCGGGTCGGCTGAAAAGCCTATCACATTTCAAAACTATGAGA    298

BSNT_05566___    299 ATGAAAACGTCGTGATTAGCGGTGAATCCATTACGAACGCTGAATATGAA    348
                     |||||||.|||||.||.|||||.|||||..|||.|.||||.|||||||||
BL01495___ywo    299 ATGAAAAAGTCGTCATCAGCGGAGAATCTGTTAAGGACGCGGAATATGAA    348

BSNT_05566___    349 ACACCGCTTATTCGTATTCACGATAAACATGACATTGCCATCAGCGGTTT    398
                     ||||||||.||||..||||||.||.||||..||||..|.||||||||..|
BL01495___ywo    349 ACACCGCTCATTCAGATTCACAATCAACAGTACATCACAATCAGCGGACT    398

BSNT_05566___    399 AACAATTCAAGATCTTTCTGTTTCATCTGAGGAAGCAACTGCTATAGGGA    448
                     .||.||||||||.|||||.||||||||.||.||||||||.||.||.||.|
BL01495___ywo    399 GACGATTCAAGACCTTTCCGTTTCATCAGAAGAAGCAACAGCCATGGGAA    448

BSNT_05566___    449 TTTATGTATCAGGGTCCAGCAGTCATATTGCCATTAAGGATAATCACATC    498
                     |||||||.|||||.|||||||||||||||.||||.||..|.||||||.||
BL01495___ywo    449 TTTATGTGTCAGGCTCCAGCAGTCATATTACCATCAAAAACAATCACGTC    498

BSNT_05566___    499 CGGGGTATTAAGACAACTGCGGATGAAGGAAATGCTCACGGAATCGCAGT    548
                     ||||.|||.||.|||||.||||||||.||.|||||.|||||.||.||.||
BL01495___ywo    499 CGGGATATAAAAACAACAGCGGATGATGGCAATGCCCACGGGATTGCCGT    548

BSNT_05566___    549 TTATGGGACTGGCAGCATGAAAGACATCCAAATCGAGGACAATACAGTTG    598
                     ||||||..|.|||||||||||||||||..|.||||||||||||||.||||
BL01495___ywo    549 TTATGGCTCCGGCAGCATGAAAGACATTAAGATCGAGGACAATACGGTTG    598

BSNT_05566___    599 AGAAACTGACGCTTGGAGCGAGTGAAGCAGTTGTGCTGAACGGTAATATC    648
                     |.||.|||||.||.||||||||||||||.||||||||||||||.||.||.
BL01495___ywo    599 AAAAGCTGACACTCGGAGCGAGTGAAGCGGTTGTGCTGAACGGAAACATT    648

BSNT_05566___    649 GACGGCTTCACAGTTGCAGGCAATGTGGTCCGCAACAATAACAACATCGG    698
                     |||||.|||||.||...||||||||||||.|||.||||||||||||||||
BL01495___ywo    649 GACGGTTTCACGGTGAGAGGCAATGTGGTTCGCGACAATAACAACATCGG    698

BSNT_05566___    699 GATTGATCTAATTGGTTATGAGGGAACCGCGGATAAAAACGATTACGTGC    748
                     .||||||||.||.||.|||||.|||||.||.|.|.|||||||||..||||
BL01495___ywo    699 AATTGATCTGATCGGATATGAAGGAACGGCCGCTCAAAACGATTTTGTGC    748

BSNT_05566___    749 GAAACGGAATCGTAGAAAACAATACAGTTTATCAAAACTCGACTTACGGC    798
                     |||||||.||||||||||||||.||.|||||..|.|||||.||||||||.
BL01495___ywo    749 GAAACGGTATCGTAGAAAACAACACGGTTTACGATAACTCCACTTACGGA    798

BSNT_05566___    799 AATCCTGCTTATGGAGATGAATACTCAGCGGGCGGGATTTATGTCGATGG    848
                     ||||||||.|||||.|||||.||.||.||||||||.||.|||||.||.||
BL01495___ywo    799 AATCCTGCCTATGGTGATGACTATTCTGCGGGCGGAATATATGTTGACGG    848

BSNT_05566___    849 AGGACACAAG-ATCGAAATTAAGAACAACACAGTTTACGATAACGATATT    897
                     |||||| ||| ||.||.||||||.|.||.||.||.||||..||||||||.
BL01495___ywo    849 AGGACA-AAGCATTGACATTAAGGAAAATACGGTCTACGGCAACGATATC    897

BSNT_05566___    898 GGGATTGAAGCAACGTCTGAACACAAAGGAAAGTATGCAAATGCCATTCA    947
                     ||.||||||||||||||||||||.|||||.||.|||||..|||..|||||
BL01495___ywo    898 GGAATTGAAGCAACGTCTGAACATAAAGGGAAATATGCTGATGATATTCA    947

BSNT_05566___    948 GATCACTGACAACAAAGTGTACAACAATGCGTACACCGGTATTTCAATCG    997
                     .||.||.||||||||||||||..|.||||||||.||.||.|||||.||||
BL01495___ywo    948 AATAACCGACAACAAAGTGTATGAGAATGCGTATACGGGCATTTCTATCG    997

BSNT_05566___    998 GAGGATATGACAAAAAGCGGGGCGGCACCAGCAATTCTCTGATTGCCCGC   1047
                     |.|||||.|||.||||||||||.|||||||||.|||||.|.|||||.|.|
BL01495___ywo    998 GCGGATACGACCAAAAGCGGGGAGGCACCAGCCATTCTGTCATTGCACAC   1047

BSNT_05566___   1048 AATATTATGTACCGGAATGACACAAAGGGACTGTACGGCGGACAGCTGCT   1097
                     ||||||||.|||||.|||||.||||||||.|||.|.|||||||||||..|
BL01495___ywo   1048 AATATTATTTACCGCAATGATACAAAGGGGCTGGATGGCGGACAGCTTTT   1097

BSNT_05566___   1098 GCTGCAGTACGATACGAAAAACAACACAATTGAAAAGAATATATTGACGG   1147
                     |||.|||||.|||||.||||||||.|||||.|||||.||.||..|.||.|
BL01495___ywo   1098 GCTCCAGTATGATACAAAAAACAATACAATCGAAAAAAACATCATAACAG   1147

BSNT_05566___   1148 CCGGTGATTCCAGATTATTTATCGGAAACGATTTTACAGAAAATGAAGGA   1197
                     |..|.|||||..||.|||||||||.||||||||||||..|||||||||||
BL01495___ywo   1148 CAAGCGATTCGCGAATATTTATCGCAAACGATTTTACGAAAAATGAAGGA   1197

BSNT_05566___   1198 AATACGGTCAATCATAACGTGTACCACAAGGAAGCGGATCAAGACGGCAT   1247
                     ||||..||.||||||||||||||||||||||||.|.|...|||||||..|
BL01495___ywo   1198 AATAAAGTGAATCATAACGTGTACCACAAGGAATCCGGCAAAGACGGACT   1247

BSNT_05566___   1248 TTGGATGTGGAAAAAGAAAGAATATGATTCATTTTCGTCGTATCTAAAAG   1297
                     .|||||.||||||.||||.|||||.||.||.||||||.||||||.|||.|
BL01495___ywo   1248 ATGGATTTGGAAACAGAATGAATACGACTCGTTTTCGCCGTATCAAAACG   1297

BSNT_05566___   1298 CAACAAAAAACGATCAGCAATCCATATATGCCGATCCGATGTTTCGTGAT   1347
                     |||||||..|.|||||..|.||.||.||||||||||||||||.|||.||.
BL01495___ywo   1298 CAACAAATCAAGATCAAGACTCGATTTATGCCGATCCGATGTATCGCGAC   1347

BSNT_05566___   1348 GAAGCGTCCTATGATTTTTCGTTAGATCCTGATTCACCTGCGCGGCCTGT   1397
                     ||..|.||..||||.|||.|.|||||||||||||||||.||..||.||||
BL01495___ywo   1348 GAGTCATCTCATGACTTTACATTAGATCCTGATTCACCGGCTTGGTCTGT   1397

BSNT_05566___   1398 CATTGAATAA   1407
                     .|||||.|||
BL01495___ywo   1398 GATTGAGTAA   1407


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