Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03585 and BL01500
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:35
# Commandline: needle
# -asequence dna-align/BSNT_03585___ptb.1.5803.seq
# -bsequence dna-align/BL01500___ptb.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03585___ptb-BL01500___ptb.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03585___ptb-BL01500___ptb.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03585___ptb
# 2: BL01500___ptb
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 951
# Identity: 638/951 (67.1%)
# Similarity: 638/951 (67.1%)
# Gaps: 90/951 ( 9.5%)
# Score: 1944.0
#
#
#=======================================
BSNT_03585___ 1 ATGAAGCTGAAAGATTTAATCGGC--AAAGCGTCGATGCACAAAAATAAG 48
||||||||||||.|..||.| || ||||||.||..||...|.|||||.
BL01500___ptb 1 ATGAAGCTGAAACAACTATT--GCAAAAAGCGGCGGAGCTTGACAATAAA 48
BSNT_03585___ 49 ACCATTGCGGTTGCTCATGCTGAGGATGAGGAAGTGATCCGGGCTGTAAA 98
||..|.||.||.||.|||||.||.|||||.||||||.|.|..||.||.||
BL01500___ptb 49 ACGGTCGCCGTCGCACATGCGGAAGATGACGAAGTGCTGCAAGCGGTCAA 98
BSNT_03585___ 99 GCTGGCTGCCGAGCACCTATCCGCCCGTTTCTTG-TTAACGGGCGACAGC 147
.||.||.|.|||..|.|.||..|||||.|||||| |.|.||||| ||||.
BL01500___ptb 99 ACTTGCGGTCGACAAACAATTTGCCCGGTTCTTGCTGATCGGGC-ACAGA 147
BSNT_03585___ 148 ACAAAACTGAACGAGCTGACATCATCCATGCAAGGGCA-------TCAA- 189
..||||||.| ||||| || .|||..||.||| ||||
BL01500___ptb 148 GAAAAACTTA-------GACAT-AT-GATGACAGAGCAGAATATTTCAAA 188
BSNT_03585___ 190 -------GTGGAAATCGTCCATGCCGATACTCCTGAGGAATCGGC-AAAA 231
|||||.|||.|.|||.|.||..|.||.|.|||.||.|| |.||
BL01500___ptb 189 ACGGCACGTGGATATCATTCATTCGGAATCGCCGGCGGATTCTGCGAGAA 238
BSNT_03585___ 232 TTAGCGGTTCGTGCTGTGCATCATAAAA----CA--GCGGACGTTTTAAT 275
|| ||.||||..||||| .|||| || |||||.|||.|.||
BL01500___ptb 239 TT-GCCGTTCAAGCTGT------CAAAAGCGGCAATGCGGATGTTCTTAT 281
BSNT_03585___ 276 GAAAGGCAATGTGCCGACTTCTGTTTTGCTTAAAGCGGTATTGAACAGAC 325
|||.||.|||||.|||||..||||..|..|.|||||.||.|||||.|.|.
BL01500___ptb 282 GAAGGGGAATGTCCCGACAGCTGTGCTATTAAAAGCCGTTTTGAATAAAG 331
BSNT_03585___ 326 AGGAGGGGCTTCGGTCAT--CAAGTGTCCTTTCCCACGTGGCTGTCTTTG 373
||.|.||||||||.||.| ||.||| ||.||.||.||.||.|..||||
BL01500___ptb 332 AGTACGGGCTTCGTTCCTCGCACGTG--CTGTCACATGTAGCAGCATTTG 379
BSNT_03585___ 374 ATAT-ACCGGATTTTGACCGGCTGATGTTTGTGACAGATTCGGCAATGAA 422
|..| |.||| .|||||..|||||||.|.|||.||||||.||||.|||||
BL01500___ptb 380 AAGTCAGCGG-GTTTGAGAGGCTGATTTATGTAACAGATGCGGCGATGAA 428
BSNT_03585___ 423 TAT-TGCTCCTTCGCTGGAAGAGCTTCGGCAGATTTTGCAAAATGCCGTT 471
||| .|| ||...|||.||.|||||...|||||||||..||||.||.||.
BL01500___ptb 429 TATCAGC-CCCAAGCTTGATGAGCTGAAGCAGATTTTAGAAAACGCAGTC 477
BSNT_03585___ 472 CATGTGGCCCATGCAGT-----GGGGAACAATATGCCAAAAGCAGCTGCT 516
...||||| |..|| ||.|..||| |||||.||||..|||..|
BL01500___ptb 478 GGCGTGGC----GAGGTCGGTCGGCGTGCAA-ATGCCGAAAGTCGCTTGT 522
BSNT_03585___ 517 CTGGCAGCGGTCGAAACGGTGAACCCTAAAATGGAAGCGACCGTGAATGC 566
||.||.||.||.|||||.|||||.||....|||||||||||..|||||||
BL01500___ptb 523 CTTGCCGCAGTGGAAACAGTGAATCCCGCGATGGAAGCGACATTGAATGC 572
BSNT_03585___ 567 AGCTGCTCTAG-CTCAAATGTACAAAAGGGGCCAGATCAAAGGCTGCATT 615
|||||| ||.| |.||.|||.|..|..|||||||.||||||..||||.||
BL01500___ptb 573 AGCTGC-CTTGACGCAGATGAATCATCGGGGCCAAATCAAAAACTGCGTT 621
BSNT_03585___ 616 GTTGATGGACCACTTGCTTTGGATAACGCAGTTTCACAAATTGCCGCGGC 665
|||||.||.||.|||||.|||||||||||..|.||.|...||||||| |
BL01500___ptb 622 GTTGACGGGCCTCTTGCATTGGATAACGCGATATCGCCGCTTGCCGC--C 669
BSNT_03585___ 666 C--CAGAAAAAAATTT-CGGGAGACGTAGCGGGCAACGCAGATATCCTTC 712
| ||.|||||.|||| ||||| .||||||.|||.|.||.||||||||.|
BL01500___ptb 670 CGGCATAAAAACATTTCCGGGA-TCGTAGCAGGCGAGGCCGATATCCTGC 718
BSNT_03585___ 713 TCGTCCCAACAATTGAGGCCGGCAATATTTTATATAAATCTCTGATTTAT 762
|.||.||..|||||||..|.||||||.|..|.||||||||..|||||.||
BL01500___ptb 719 TTGTTCCTTCAATTGAAACAGGCAATGTCCTTTATAAATCATTGATTCAT 768
BSNT_03585___ 763 TTTGCCAAGGCCAGCGTGGCGGCTGTCATT---ACAGGAGCCAAAGCACC 809
|||||....||.|..||||..|| |||| .||||.||.||||||||
BL01500___ptb 769 TTTGCGGGTGCAAAAGTGGGAGC---CATTTTAGCAGGGGCAAAAGCACC 815
BSNT_03585___ 810 GATTGCCTTAACAAGCAGAGCGGACTCTGCTGAAAATAAACTGTATTCCA 859
.||.|||||.||||||||.||.||.||.||.|||||.||..|||||||.|
BL01500___ptb 816 CATCGCCTTGACAAGCAGGGCCGATTCCGCAGAAAACAAGTTGTATTCGA 865
BSNT_03585___ 860 TTGCGCTGGCAATATGCGCATCTGAAGAATACAC-ACATTAG-------- 900
||||..||||..|.||..|.||||||| ||| ||||.||
BL01500___ptb 866 TTGCTTTGGCGCTGTGTACGTCTGAAG----CACGACATGAGGAGGAATA 911
BSNT_03585___ 900 - 900
BL01500___ptb 912 A 912
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