Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03582 and BL01503

See Amino acid alignment / Visit BSNT_03582 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:34
# Commandline: needle
#    -asequence dna-align/BSNT_03582___lpdV.1.5803.seq
#    -bsequence dna-align/BL01503___bfmBC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03582___lpdV-BL01503___bfmBC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03582___lpdV-BL01503___bfmBC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03582___lpdV
# 2: BL01503___bfmBC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1476
# Identity:    1060/1476 (71.8%)
# Similarity:  1060/1476 (71.8%)
# Gaps:         105/1476 ( 7.1%)
# Score: 3680.5
# 
#
#=======================================

BSNT_03582___      1 ATGGCAACTGAGTATGACGTAGTCATTCTGGGCGGCGGTACCGGCGGTTA     50
                     |||||||||||.||.||..|.||.|||||.||.||.||.||.|||||.||
BL01503___bfm      1 ATGGCAACTGAATACGATCTCGTGATTCTTGGAGGGGGCACAGGCGGCTA     50

BSNT_03582___     51 TGTTGCGGCCATCAGAGCCGCTCAGCTCGGCTTAAAAACAGCCGTTGTGG    100
                     |||.||.||||||||||||.|.|||||.||..|.|||||||||||.||.|
BL01503___bfm     51 TGTGGCCGCCATCAGAGCCTCGCAGCTGGGGCTGAAAACAGCCGTCGTTG    100

BSNT_03582___    101 AAAAGGAAAAACTCGGAGGAACATGTCTGCATAAAGGCTGTATCCCGAGT    150
                     |||||.|.||.|||||.||.||.||.||.|||||||||||.||||||...
BL01503___bfm    101 AAAAGCAGAAGCTCGGCGGCACGTGCCTTCATAAAGGCTGCATCCCGTCG    150

BSNT_03582___    151 AAAGCGCTGCTTAGAAGCGCAGAGGTATACCGGACAGCTCGTGAA-----    195
                     ||.|||||.|||||||||||.||.||||||.|||||||     ||     
BL01503___bfm    151 AAGGCGCTCCTTAGAAGCGCGGAAGTATACAGGACAGC-----AAAAAAG    195

BSNT_03582___    196 GCCGATCAATTCGGGGTGG----------AAACGG-CTGGCGTGTCCCTC    234
                     ||.||..|||||||.||||          |..||| || |||..|..|||
BL01503___bfm    196 GCGGACGAATTCGGAGTGGTCATTCCTGAAGTCGGACT-GCGGTTTTCTC    244

BSNT_03582___    235 AACTTTGAAAAAGTGCAGCAGCGTAAGCAAGCCGTTGTTGATAAGCTTGC    284
                     ||.||..|        ||||  |.||.|||....|..||||..||| |||
BL01503___bfm    245 AAGTTCAA--------AGCA--GAAAACAAAAAATAATTGACCAGC-TGC    283

BSNT_03582___    285 AGC--GGGTGTAAATCATTTAATGAAAAAAGGAAAAATTGACGTGTACAC    332
                     | |  .|||||.||.||.||.||||||||||||||.||.||.||.|||..
BL01503___bfm    284 A-CAACGGTGTCAAACACTTGATGAAAAAAGGAAAGATCGATGTTTACGA    332

BSNT_03582___    333 CGGATAT-GGACGTATCCTTGGACCGTCAATCTTCTCTCCGCTGCCGGGA    381
                     .||| || |||||.||.||.||.|||||.||.||.||.|||.||||.||.
BL01503___bfm    333 AGGA-ATCGGACGGATTCTCGGGCCGTCGATTTTTTCCCCGATGCCTGGG    381

BSNT_03582___    382 ACAATTTCTGTTGAGCGGGGAAATGGCGAA-------GAAAATGACATGC    424
                     ||..||||.||||||       ||||||||       ||||||||.||||
BL01503___bfm    382 ACGGTTTCCGTTGAG-------ATGGCGAACGGGGATGAAAATGAGATGC    424

BSNT_03582___    425 TGATACCGAAACAAGTGATCATTGCAACAGGATCAAGACCGAGAATGCTT    474
                     |.|||||||||.|.||.|||||.||.|||||.|||||.||.||...|||.
BL01503___bfm    425 TCATACCGAAAAACGTCATCATCGCTACAGGCTCAAGGCCCAGGTCGCTG    474

BSNT_03582___    475 CCGGGTCTTGAAGC-GGACGG-TAAGTCTGTACTGACTTCAGATGAGGCG    522
                     ||.||.|||| ||| .||||| .||..| ||.|||.|.|||||.||.|||
BL01503___bfm    475 CCAGGGCTTG-AGCTTGACGGAGAAAAC-GTTCTGTCATCAGACGAAGCG    522

BSNT_03582___    523 CTCCAAATGGAGGAGCTGCCACAATCAATCATCATTGTCGGCGGAGGGGT    572
                     ||..||.|.|||.||||.||....||.||..|.||.|||||.|||||.||
BL01503___bfm    523 CTTGAACTTGAGCAGCTTCCGGCTTCCATGCTGATCGTCGGAGGAGGTGT    572

BSNT_03582___    573 TATCGGTATCGAATGGGCGTCTATGCTTCATGATTTTGGTGTGAAGGTAA    622
                     .|||||.|||||.|||||.||.|||||..|.|||||.|||||..|.||.|
BL01503___bfm    573 CATCGGGATCGAGTGGGCTTCCATGCTGAACGATTTCGGTGTTGATGTCA    622

BSNT_03582___    623 CGGTTATTGAATACGCGGATCGCATATTGCCGACTGAAGATCTAGAGATT    672
                     |.||.|||||.||.||.||.||.||.|||||||||||||||...||.|||
BL01503___bfm    623 CCGTCATTGAGTATGCAGACCGGATTTTGCCGACTGAAGATGCCGATATT    672

BSNT_03582___    673 TCAAAAGAAATGGA----AAGTCTTCTTAAGAAAAAAGGCATC-CAGTTC    717
                     ||.|..||||||.|    .||    ||...||||||||||||| || .|.
BL01503___bfm    673 TCTAGGGAAATGCAGGCGCAG----CTCGCGAAAAAAGGCATCACA-ATG    717

BSNT_03582___    718 ATAACAGGGGCAAAAGTGCTGCCTGACACAAT-GACAAAAACATCAGATG    766
                     ||.||.||.||||||||||||||.||||||.| ||.|||..|    ||||
BL01503___bfm    718 ATCACGGGAGCAAAAGTGCTGCCCGACACATTGGAGAAAGGC----GATG    763

BSNT_03582___    767 ATATCAGCATACAAGCGGAAAAAGACGGAGAAACCGTTA-----CCTACT    811
                     ...|||||||.||||||||||||||||||||||     |     ||||.|
BL01503___bfm    764 CGGTCAGCATTCAAGCGGAAAAAGACGGAGAAA-----AACAATCCTATT    808

BSNT_03582___    812 CTGCTGAGAAAATGCTAGTTTCCATCGGCAGACAGGCAAATATCGAAGGC    861
                     |.||||||||||||||.||.||..||||.||.|||||||||||.||.||.
BL01503___bfm    809 CCGCTGAGAAAATGCTCGTATCGGTCGGAAGGCAGGCAAATATTGAGGGT    858

BSNT_03582___    862 ATTGGCCTAGAGAACACCGATAT-----TGTTACTGAAAATGGCATGAT-    905
                     ||.||.||.||.|||||.|||||     ||     |||||.|||.|.|| 
BL01503___bfm    859 ATCGGTCTGGAAAACACGGATATCCAGGTG-----GAAAACGGCTTTATC    903

BSNT_03582___    906 -TTCAGTCAATGAAAGC---TGCCAGACGAAGGAATCTCATATTTATGCA    951
                      |   |.|||  |.|||   |.||||||.||.|||||.||.||.|||||.
BL01503___bfm    904 GT---GACAA--ACAGCATGTACCAGACAAAAGAATCCCACATCTATGCG    948

BSNT_03582___    952 ATTGGAGACGTAATCGGTGGTCTGCAGTTAGCTCACGTTGCTTCACATGA   1001
                     ||.|||||.||.|||||.||.||.|||.|.||.||.||.|||||.||.||
BL01503___bfm    949 ATAGGAGATGTGATCGGCGGCCTTCAGCTTGCACATGTAGCTTCTCACGA    998

BSNT_03582___   1002 GGGAATTATTGCTGTTGAGCATTTTGCAGGTCTCAATCCGCATCCGC--T   1049
                     .||.||||..||.|||||||||.||||.|||...||.|||||  |||  |
BL01503___bfm    999 AGGGATTACGGCCGTTGAGCATATTGCTGGTGAAAACCCGCA--CGCCAT   1046

BSNT_03582___   1050 TGATCCGACGCTTGTGCCGAAGTGCATTTACTCAAGCCCTGAAGCTGCCA   1099
                     .|||....|||||||..|.||.|||||.||.||||||||||||||.||..
BL01503___bfm   1047 CGATTATTCGCTTGTTTCAAAATGCATCTATTCAAGCCCTGAAGCCGCAT   1096

BSNT_03582___   1100 GTGTTGGCTTAACCGAAGACGAAGCAAAGGCGAACGGGCATAATGTCAAA   1149
                     ..||.|||||.||.||.|..||.||.||||||.|.|||.|.|..||.|||
BL01503___bfm   1097 CGGTCGGCTTGACAGAGGGTGAGGCGAAGGCGCAGGGGAAAAGCGTTAAA   1146

BSNT_03582___   1150 ATCGGCAAGTTCCCATTTATGGCGATTGGAAAAGCGCTTGTATACGGTGA   1199
                     .|.|||||.||.||.|||..|||||||||.||||||||.||.||||||||
BL01503___bfm   1147 GTAGGCAAATTTCCGTTTCAGGCGATTGGCAAAGCGCTCGTGTACGGTGA   1196

BSNT_03582___   1200 AAGCGACGGTTTTGTCAAAATCGTGGCGGACCGAGATACAGATGATATTC   1249
                     .|..|||||.||||||||||||||.||.||.||.||.||||||||.|||.
BL01503___bfm   1197 GACGGACGGCTTTGTCAAAATCGTCGCCGATCGCGAAACAGATGACATTT   1246

BSNT_03582___   1250 TCGGCGTTCATATGATCGGCCCGCATGTCACCGACATGATTTCTGAAGCG   1299
                     |.||||||||.|||||||||||||||||.||.||||||||.||||||||.
BL01503___bfm   1247 TGGGCGTTCACATGATCGGCCCGCATGTGACAGACATGATATCTGAAGCC   1296

BSNT_03582___   1300 GGTCTTGCCAAAGTGCTGGACGCAACGCCGTGGGAGATCGGGCAAACGAT   1349
                     |||||.||.||.|||||.|||||.||.||||||||..||||.||||||||
BL01503___bfm   1297 GGTCTGGCAAAGGTGCTTGACGCCACCCCGTGGGAAGTCGGTCAAACGAT   1346

BSNT_03582___   1350 TCACCCGCATCCAACGCTTTCTGAAGCAATTGGGGAAGCAGCGCTTGCCG   1399
                     .|||||||||||.|||||.||.||.||.||.||.|||||.||.|||||||
BL01503___bfm   1347 CCACCCGCATCCGACGCTGTCGGAGGCGATCGGAGAAGCCGCCCTTGCCG   1396

BSNT_03582___   1400 CAGATGGCAAAGCCATTCATTTTTAA   1425
                     ..|||||.|||||.|||||||||||.
BL01503___bfm   1397 TGGATGGAAAAGCGATTCATTTTTAG   1422


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