Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03630 and BL01529

See Amino acid alignment / Visit BSNT_03630 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:38
# Commandline: needle
#    -asequence dna-align/BSNT_03630___yqhY.1.5803.seq
#    -bsequence dna-align/BL01529___yqhY.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03630___yqhY-BL01529___yqhY.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03630___yqhY-BL01529___yqhY.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03630___yqhY
# 2: BL01529___yqhY
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 413
# Identity:     321/413 (77.7%)
# Similarity:   321/413 (77.7%)
# Gaps:           7/413 ( 1.7%)
# Score: 1214.0
# 
#
#=======================================

BSNT_03630___      1 ATGAAA---GACAACAGCTTGCTTAAAATGGATCACGAAGATACGCATTT     47
                     .|||||   |||||||||||..|..|||||...||.|||||.|..|||||
BL01529___yqh      1 TTGAAAGACGACAACAGCTTATTGGAAATGAGCCATGAAGACAATCATTT     50

BSNT_03630___     48 GGGTAAGGTTGAGATTGCACCGGAGGTCATTGAGGTCATTGCCGGCATTG     97
                     |||.||.||.||.||.||.|||||.||.|||||.|||||||||||.||.|
BL01529___yqh     51 GGGAAAAGTGGAAATCGCTCCGGAAGTGATTGAAGTCATTGCCGGAATCG    100

BSNT_03630___     98 CAGCATCAGAAGTTGATGGGGTTGCCGAAATGCGCGGAAACTTTGCGACA    147
                     ||||.||.||||||||.||.||.||.|||||||||||.||.|||||||||
BL01529___yqh    101 CAGCTTCCGAAGTTGAAGGCGTAGCTGAAATGCGCGGCAATTTTGCGACA    150

BSNT_03630___    148 GGCGTCGTTGAGCGCTTTGGCAAAGTGAATCATGGCAAAGGTGTCAAAGT    197
                     ||.|||||.||.||.|||||.|||..||||||.||||||||.||||||||
BL01529___yqh    151 GGTGTCGTAGAACGGTTTGGAAAAAAGAATCACGGCAAAGGCGTCAAAGT    200

BSNT_03630___    198 CGACCTGGCGGAAGACGGAATTACGATCGATGTATACTGTGTCGTTACAT    247
                     .||..||.|.||.||||||||||..||.|||||.||.||.||..|.|..|
BL01529___yqh    201 TGATTTGTCCGATGACGGAATTATCATTGATGTTTATTGCGTGATGATGT    250

BSNT_03630___    248 TTGGCGTTTCGATTCCGAAAGTTGCAGCAT-CCGTTCAGGAAAACATTCG    296
                     |||||||.||||||||.|||||||| |.|| ||||||||||.||.||.||
BL01529___yqh    251 TTGGCGTGTCGATTCCTAAAGTTGC-GAATGCCGTTCAGGATAATATCCG    299

BSNT_03630___    297 TCAAAC-CTTATTAAATATGACGTCTCTTTCGATTAACGAGATCAATATT    345
                     .||.|| ||| .|.||||||||..|||||||||||||.||.|||||||||
BL01529___yqh    300 CCAGACGCTT-CTCAATATGACAGCTCTTTCGATTAATGAAATCAATATT    348

BSNT_03630___    346 CACATCGTCGGCATTCAATTTGACACAAAAGCCCAAGAAGTCCAAATCGA    395
                     ||||||||.|||||||||||.||..|||||.|.||.||.||..|||||||
BL01529___yqh    349 CACATCGTTGGCATTCAATTCGATTCAAAAACGCACGAGGTGGAAATCGA    398

BSNT_03630___    396 CGAAGAAATGTAA    408
                     ..||||.|||||.
BL01529___yqh    399 TCAAGAGATGTAG    411


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