Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03645 and BL01537
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:39
# Commandline: needle
# -asequence dna-align/BSNT_03645___spoIIIAD.1.5803.seq
# -bsequence dna-align/BL01537___spoIIIAD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03645___spoIIIAD-BL01537___spoIIIAD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03645___spoIIIAD-BL01537___spoIIIAD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03645___spoIIIAD
# 2: BL01537___spoIIIAD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 404
# Identity: 291/404 (72.0%)
# Similarity: 291/404 (72.0%)
# Gaps: 40/404 ( 9.9%)
# Score: 1142.0
#
#
#=======================================
BSNT_03645___ 1 TTGCAGATTGACATTGTTCAAATTGTAGGTTTAGGGCTGATCGCCACCTT 50
.|||||||||||||
BL01537___spo 1 ------------------------------------ATGATCGCCACCTT 14
BSNT_03645___ 51 CCTTTCTTTAATTGTAAAAGAACAAAAGCCGACTTTTGCGTTTTTAATCG 100
|||....||.|||||.|||||.|||||.|||||.|||||.|||||.||.|
BL01537___spo 15 CCTCAGCTTGATTGTGAAAGAGCAAAAACCGACGTTTGCTTTTTTGATTG 64
BSNT_03645___ 101 TCGTTTTTGCCGGATGTGCCATTTTTCTTTAT--TTGGTAGACCAAATCT 148
|||||||||||||.||..|.||||| ||||| ||.|||||.||..|||
BL01537___spo 65 TCGTTTTTGCCGGCTGCACGATTTT--TTTATTCTTAGTAGATCAGGTCT 112
BSNT_03645___ 149 ACGACATTATTCGAATGATAGAAAAAATTGCGATTAATGCAAATGTCAAC 198
||||.||.|||||.|||||.||||||||.||....|||||.||..|||||
BL01537___spo 113 ACGAAATCATTCGGATGATTGAAAAAATAGCTGCCAATGCCAACATCAAC 162
BSNT_03645___ 199 ATGGTCTATGTTGAAACCATTTTAAAGATTATCGGAATCGCCTATATTGC 248
|||.|.|||||.|||||.|||||.|||||||||||.||.||.||||||||
BL01537___spo 163 ATGATGTATGTCGAAACGATTTTGAAGATTATCGGGATTGCTTATATTGC 212
BSNT_03645___ 249 TGAATTCGGGGCACAGCTCACAAAAGATGCCGGTCAAGGAGCCATCGCCT 298
.||.||.||.||.|||||.|||||.||||||||.||.||.||.||.||.|
BL01537___spo 213 GGAGTTTGGCGCCCAGCTGACAAAGGATGCCGGACAGGGTGCGATTGCTT 262
BSNT_03645___ 299 CGAAAATAGAATTGGCGGGGAAAATTTTAATACTCGTAATGGCTGTGCCT 348
||||.||.||||||||.||.|||||..|.||..|.||.||||||||||||
BL01537___spo 263 CGAAGATCGAATTGGCAGGCAAAATCCTCATCTTAGTCATGGCTGTGCCT 312
BSNT_03645___ 349 ATTTTAACCGTCATTATCGAAACGATTCTCGGACTTATACCTTCTATGTC 398
|||||||||||.||||||||||||||..|||||||.||.|||||.|||||
BL01537___spo 313 ATTTTAACCGTGATTATCGAAACGATCATCGGACTCATCCCTTCCATGTC 362
BSNT_03645___ 399 ATAA 402
.||.
BL01537___spo 363 TTAG 366
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