Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03647 and BL01539
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:39
# Commandline: needle
# -asequence dna-align/BSNT_03647___spoIIIAB.1.5803.seq
# -bsequence dna-align/BL01539___spoIIIAB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03647___spoIIIAB-BL01539___spoIIIAB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03647___spoIIIAB-BL01539___spoIIIAB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03647___spoIIIAB
# 2: BL01539___spoIIIAB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 533
# Identity: 379/533 (71.1%)
# Similarity: 379/533 (71.1%)
# Gaps: 34/533 ( 6.4%)
# Score: 1265.0
#
#
#=======================================
BSNT_03647___ 1 ATGCTGAAGCTGCTGGGCGCTGTATTCATTGTGGTAGCGACAACATGGAC 50
|||||||||||..|.||.||.||..|.|||.|||.|||..|.||||||||
BL01539___spo 1 ATGCTGAAGCTTTTAGGTGCCGTGCTTATTTTGGCAGCAGCCACATGGAC 50
BSNT_03647___ 51 AGGTTTTGAGATGGCGAAGATTTATACAGAACGGCCGCGGCAAATCCGCC 100
|||.|||||.|||||||||..||..|..|||.|||||..|||||||||||
BL01539___spo 51 AGGATTTGAAATGGCGAAGCCTTTCAGGGAAAGGCCGAAGCAAATCCGCC 100
BSNT_03647___ 101 AGCTGCGTGCGGCGCTT--CAATCCCTCGAGGCTGAAATCATGTACGGCC 148
|||| ||..|.||||| ||.||..|.||||||||||||||||||||.|
BL01539___spo 101 AGCT--GTTGGCCGCTTTGCAGTCTTTGGAGGCTGAAATCATGTACGGGC 148
BSNT_03647___ 149 ATACACCGCTTCATACTGCTTCACAGCAGATTGCCAAACAGCTCGCACAG 198
||||||||||.|.|...||.|||.|.|||||.||..|.|||||..|..||
BL01539___spo 149 ATACACCGCTCCGTCAGGCATCAAAACAGATCGCACACCAGCTTACCGAG 198
BSNT_03647___ 199 CCTGTTTCAG-CTCTTT-TTTCCG-CATT--CAGTGATCAGCTGGACAAG 243
||.|| || |||||| ||||.| |||| || ||.|||||.||.||.
BL01539___spo 199 CCGGT---AGCCTCTTTGTTTCAGACATTTGCA--GAACAGCTTGAAAAA 243
BSNT_03647___ 244 GGAAGTGATTCCGCGAAAACGGCGTGGGAGCAAAGCTTAAAGAAGGTATG 293
||.||.|.|||.||....|||||.|||||..|.|||.|..||||.|||||
BL01539___spo 244 GGCAGCGCTTCAGCAGGGACGGCATGGGAAGACAGCCTGGAGAAAGTATG 293
BSNT_03647___ 294 G---GATACCCTGTCTTTGAAAAAAAGCGAATACGAAGTGCTGAAGCAGT 340
| ||.|| |.||.|.|||||.|..||||||||..|..|...|||.|
BL01539___spo 294 GCCCGAAAC---GGCTCTTAAAAAGAAAGAATACGAGATTTTACGGCAAT 340
BSNT_03647___ 341 TTGGCGAGACGCTCGGGATTCATGATCGAATCTCTCAGCAAAAGCACATC 390
|.|||||.|||||.||...||||||||..||.|||||||||||.||.|||
BL01539___spo 341 TCGGCGAAACGCTGGGCCGTCATGATCTGATTTCTCAGCAAAAACATATC 390
BSNT_03647___ 391 AAGCTGGCGCTGTCACATTTGGAAGCCTCTGA-AGCGGATGCTG-AGCA- 437
||.||||||.|..|.|||||.|| || ||.|||.|||| ||||
BL01539___spo 391 AAACTGGCGTTAACCCATTTAGA-------GACAGAGGAAGCTGAAGCAA 433
BSNT_03647___ 438 ----GGCGCAAGCGAAAAATGAAAAGATGATAAAAAGTTTGGGCTTTTTA 483
.||.||.||||||||||||||.|||.|.|||||..|.||.|||||.
BL01539___spo 434 ATCTCGCCCAGGCGAAAAATGAAAAAATGGTCAAAAGCCTTGGATTTTTG 483
BSNT_03647___ 484 GCGGGCTTGTTACTCATTCTTCTATTGATGTAA 516
.||||..||.||||.||||||||||||||||||
BL01539___spo 484 ACGGGACTGCTACTGATTCTTCTATTGATGTAA 516
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