Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03656 and BL01546
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:40
# Commandline: needle
# -asequence dna-align/BSNT_03656___yqhO.1.5803.seq
# -bsequence dna-align/BL01546___yqhO.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03656___yqhO-BL01546___yqhO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03656___yqhO-BL01546___yqhO.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03656___yqhO
# 2: BL01546___yqhO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 912
# Identity: 624/912 (68.4%)
# Similarity: 624/912 (68.4%)
# Gaps: 72/912 ( 7.9%)
# Score: 2001.5
#
#
#=======================================
BSNT_03656___ 1 ATGTATATTGACGGTGTTTTTTCCGGCGGAGGAGTAAAAGGCATTGCGCT 50
|||||.||.|||||.||||||||.|||||.||..|.|||||..|||||||
BL01546___yqh 1 ATGTACATCGACGGGGTTTTTTCAGGCGGCGGCATGAAAGGGGTTGCGCT 50
BSNT_03656___ 51 CGCAGGCGCTTATGAAGTGCTTGAGGAAAAA---GGCTTCCGCTTTAAAA 97
.|..||.||.||.||||.|||| |||||| ||||||||.|||||||
BL01546___yqh 51 TGTGGGAGCATACGAAGCGCTT---GAAAAACGGGGCTTCCGATTTAAAA 97
BSNT_03656___ 98 GAGTTGCGGGTACAAGCGCCGGCGCCATTATTGCCGCTTTCATTGCGTCA 147
|..|.||.||.||.||||||||..|.||.||||||.|.||.||.|||.|.
BL01546___yqh 98 GGCTGGCCGGAACGAGCGCCGGTTCGATCATTGCCTCATTTATCGCGGCC 147
BSNT_03656___ 148 GGTTACACCAGTAAGGAAATCCACGCTTTAATTGAAGAAGTGGACGGAGA 197
||.||.||.||...|||.||||.| .||.||| |||| |||..
BL01546___yqh 148 GGCTATACAAGCGCGGAGATCCGC----CAAATGA-----TGGA-GGAAT 187
BSNT_03656___ 198 GAAAT----------TGCTGGATCAGAGGTACTCATTTCTCCCCTTAAAG 237
.|||| |.||.||.|.|||||..|||.|..|.||.||.||.
BL01546___yqh 188 TAAATGAAAGCGAGCTCCTTGACCCGAGGTTTTCACTCTTGCCTTTGAAA 237
BSNT_03656___ 238 ATGCTCCAGTGGGTGTCCATCTACTGGCGTCTTGGCTTATACAAAGGCGA 287
.||||.||.||||..||.||.||.|||||.||.||.|||||.|||||.||
BL01546___yqh 238 TTGCTGCAATGGGCATCGATTTATTGGCGGCTCGGTTTATATAAAGGAGA 287
BSNT_03656___ 288 TACGATAGAAAAATGGATTGCTGATCTGTTAAGAGCGAAAGGCATAAGGG 337
||...|.|||||.||||||.|.||...|||.|.||||||.|||||....|
BL01546___yqh 288 TAAATTGGAAAACTGGATTTCCGAAAAGTTGAAAGCGAAGGGCATTTCAG 337
BSNT_03656___ 338 TTTTCGGCGATTT---ACA--GAAAGGGTCTCTGCGCCTTATTGCTTCTG 382
|.|||||.|||.| ||| ||||| |||....|.||.|||||.|
BL01546___yqh 338 TGTTCGGGGATCTTGAACAGGGAAAG-----CTGAAGTTGATCGCTTCCG 382
BSNT_03656___ 383 ATCTGA-CAAACGGCACCATGATTGTTTTGCCGGACGATTTGGCCCGTTA 431
| ||.| |.|||||||..|||.||||..||||.||||||||...|.|.||
BL01546___yqh 383 A-CTTATCGAACGGCAAGATGCTTGTGCTGCCTGACGATTTAAACAGGTA 431
BSNT_03656___ 432 CGGGTTAAATCC----CGATATGTTCCCGGTTGCCAGAGCGGTCAGAATG 477
|||.||.||||| |||| ||.|| ||.|||||.||||||.|.|||
BL01546___yqh 432 CGGTTTGAATCCAGGGCGAT---TTTCC-GTCGCCAGGGCGGTCCGGATG 477
BSNT_03656___ 478 AGCTGCAGCATTCCGTATTTTTTTGAACCGATAAAATTAAAAACGGACAC 527
|||||||||||.||.|||||||||||.|||.|.||..|.|| |.|||
BL01546___yqh 478 AGCTGCAGCATCCCTTATTTTTTTGAGCCGGTGAAGCTCAA----GTCAC 523
BSNT_03656___ 528 -------AGGCACCGCCACGGTTGTCGACGGAGGTGTGTTAAGCAATTTC 570
|..||.||.| ||.||.|||||.||.||..|.||||||||.
BL01546___yqh 524 CTCTCGGAATCAGCGTC---GTCGTAGACGGCGGAGTTCTGAGCAATTTT 570
BSNT_03656___ 571 CCCATCTGGCTGTTTTCAAAGGAAAGAAAGCGCCCTGTGATCGGTGTGAC 620
||.||.|||||||||.|||..||||.|||.||.||.||..|.||..|.||
BL01546___yqh 571 CCGATGTGGCTGTTTACAACAGAAAAAAAACGGCCGGTATTGGGCATCAC 620
BSNT_03656___ 621 GCTTGCGCCGCGTGAAAGAGAGCGTCCGAAAAAAAATATCCGCAACGCTT 670
|||...|||...|||||.||||.|.|||||.||||..||....||.||.|
BL01546___yqh 621 GCTGATGCCCAATGAAAAAGAGAGGCCGAAGAAAACGATTAAAAATGCGT 670
BSNT_03656___ 671 TTGAACTGTTCGGCGCCCTGTTTGAAACGATGAAGGATGCCCATGACGCA 720
|.||.||||||||.||.||||||||.||||||||.||.||.||||||||.
BL01546___yqh 671 TCGAGCTGTTCGGGGCGCTGTTTGAGACGATGAAAGAGGCGCATGACGCC 720
BSNT_03656___ 721 AGGCACATTGCATCACG---CTATGAACAAAATATCATTTTTCTCCCGGT 767
||||||||||| |||| | ||||.|..||.|||||||||.|.||.||
BL01546___yqh 721 AGGCACATTGC--CACGAAAC-ATGAGCGGAACATCATTTTTTTGCCTGT 767
BSNT_03656___ 768 TGATGGCGTAATGGCAACTGATTTTC---ATTTAACACAACAAAAAAAAC 814
|||.|..||..||.|.||||| .||| ||.| |...|.|||||||||
BL01546___yqh 768 TGAGGAAGTTTTGTCGACTGA-ATTCGCGATGT--CGGCAGAAAAAAAAC 814
BSNT_03656___ 815 TAGCCCTGATTGAGCTAGGTAAAAGACGGACAGAGCTGTTTTTAAAGCAG 864
||||.||.||.||||||||.||||.|||.|||||..|.|||||.||.|||
BL01546___yqh 815 TAGCTCTAATCGAGCTAGGAAAAAAACGAACAGAATTATTTTTGAAACAG 864
BSNT_03656___ 865 TGGACCTATTAA 876
|||||.|.||||
BL01546___yqh 865 TGGACGTTTTAA 876
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