Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03674 and BL01553
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:41
# Commandline: needle
# -asequence dna-align/BSNT_03674.1.5803.seq
# -bsequence dna-align/BL01553___yqzG.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03674-BL01553___yqzG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03674-BL01553___yqzG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03674
# 2: BL01553___yqzG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 417
# Identity: 222/417 (53.2%)
# Similarity: 222/417 (53.2%)
# Gaps: 135/417 (32.4%)
# Score: 658.5
#
#
#=======================================
BSNT_03674 1 ATGCATATCCCATTATTATTTGGTAATAATAAACAAAGAAAGGGTGACAG 50
BL01553___yqz 0 -------------------------------------------------- 0
BSNT_03674 51 CATGATGATCAAACAATGTGTGATT-TG-TCTAT-------CTCTTCTCG 91
.||.|.||| |||||...||| || |||.| || ||||.|
BL01553___yqz 1 ----GTGCTGAAA-AATGTCATATTATGTTCTTTTTTACTGCT-TTCTAG 44
BSNT_03674 92 TCTTTGGCACCACAGCCGCTCA----------CGCAG---AAGAAACACC 128
|.|||| |||||||| .|||| |.||||||
BL01553___yqz 45 -CATTGG-------GCCGCTCAATGCCCATGCGGCAGCTTACGAAACA-- 84
BSNT_03674 129 GCTTGTAACCGCCCGCCACATGTCCAAATGGGAAGAGATTGCTGTAAAAG 178
||||| ||||||.||.||||||||.|..||.||..|.|
BL01553___yqz 85 ----------GCCCG---CATGTCTAAGTGGGAAGAAAAAGCGGTTGAGG 121
BSNT_03674 179 AAGCAAAAAAAAGGTACCCGCTTGCACAGGTACTGTTCAAACAAAAAGTA 228
||||||||||.||.||.|||...|||.|.||.|...|||...||||||||
BL01553___yqz 122 AAGCAAAAAAGAGATATCCGGAAGCAGAAGTGCGCCTCACGAAAAAAGTA 171
BSNT_03674 229 TGGGACCGTAAAAGAAAA-------GATGAAGCAGTGAAGCAATACCATT 271
|||||.|| ||| ||||||||.||.||.|||||||||.
BL01553___yqz 172 TGGGATCG-------AAAGCGGGCCGATGAAGCGGTCAAACAATACCATG 214
BSNT_03674 272 TAACTCTGAGGGAAGGGTCAAAAGAA----TTCGGCGTTTTTGTGACGAT 317
|.||..||||.||||| |||.|| |||||.||.|||||.||.||
BL01553___yqz 215 TCACATTGAGTGAAGG----AAATAAAAATTTCGGAGTGTTTGTCACAAT 260
BSNT_03674 318 TTCATTTGATCCTTATAGC------CAAAAGGTCAATAAAATTGCCATAT 361
|||||||||.||| || ||||| |.||.|||.|.|.|.|..
BL01553___yqz 261 TTCATTTGAACCT----GCGACACACAAAA--TTAACAAAGTCGTCGTTG 304
BSNT_03674 362 TAGAAGAATATCAATAA 378
|.|||||||||.|||||
BL01553___yqz 305 TGGAAGAATATAAATAA 321
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