Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03702 and BL01555

See Amino acid alignment / Visit BSNT_03702 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:43
# Commandline: needle
#    -asequence dna-align/BSNT_03702___yqgW.1.5803.seq
#    -bsequence dna-align/BL01555___yqgW.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03702___yqgW-BL01555___yqgW.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03702___yqgW-BL01555___yqgW.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03702___yqgW
# 2: BL01555___yqgW
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 179
# Identity:     127/179 (70.9%)
# Similarity:   127/179 (70.9%)
# Gaps:          10/179 ( 5.6%)
# Score: 395.5
# 
#
#=======================================

BSNT_03702___      1 ATGTTACTTGTCGTGATTTTCGGCCTTGT--CGCTCTTTTC-GCTTTATG     47
                     |||||.||.||..|.||||||||.||.||  ||.|.||.|| |||.| ||
BL01555___yqg      1 ATGTTGCTCGTGATCATTTTCGGTCTAGTCACGATATTATCTGCTCT-TG     49

BSNT_03702___     48 GGGAGTCTTGCGTTCTGTTAGAAATAAA--AATATACTCGGGTTTTTATT     95
                     ||| .|||| ||||||.||  |||.|||  ||..|.||.||..|.||.||
BL01555___yqg     50 GGG-TTCTT-CGTTCTCTT--AAACAAATCAACGTTCTTGGCATCTTGTT     95

BSNT_03702___     96 AGCCGGTGCCACCTTATTTGTCTTTGGATGGTTTACCGTGATGACCGTAA    145
                     .|.|||.||..|.||.||.||.||.||||||||||||||.|||||..|.|
BL01555___yqg     96 CGGCGGGGCGGCTTTTTTAGTGTTCGGATGGTTTACCGTCATGACAATTA    145

BSNT_03702___    146 TAAACAGCGGGTATCCAACCGCACATTAA    174
                     |.||||||||||||||.||.|..||.|||
BL01555___yqg    146 TTAACAGCGGGTATCCGACAGTCCACTAA    174


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