Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00529 and BL01558
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:09
# Commandline: needle
# -asequence dna-align/BSNT_00529___opuAB.1.5803.seq
# -bsequence dna-align/BL01558___opuAB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00529___opuAB-BL01558___opuAB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00529___opuAB-BL01558___opuAB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00529___opuAB
# 2: BL01558___opuAB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 870
# Identity: 638/870 (73.3%)
# Similarity: 638/870 (73.3%)
# Gaps: 36/870 ( 4.1%)
# Score: 2281.0
#
#
#=======================================
BSNT_00529___ 1 --------------ATGGATAGACTGCCTAGAATACCTTTAGCAGATATC 36
||.| ||.||..|.||.||||||||.|||...
BL01558___opu 1 ATGTTTACTTTATCATCG-----CTTCCCCGCATTCCTTTAGCCGATTGG 45
BSNT_00529___ 37 ATTGACCGTTTTGTTGACTGGATTACGATGACGTTTGGCGGATTCTTCGA 86
||.||.|..||||||||||||.|.|||.||.||||.|||||..|.||..|
BL01558___opu 46 ATCGATCAGTTTGTTGACTGGCTGACGGTGTCGTTCGGCGGTGTATTTAA 95
BSNT_00529___ 87 CGGAATCGCTAACGGATTGGCCGCTTTTGTAAATGGAATTGTCACCGGTC 136
||||||.||.|.||||.|||...|.|||||..|||..||||||...||.|
BL01558___opu 96 CGGAATTGCCAGCGGAGTGGAATCGTTTGTTGATGAGATTGTCCAAGGGC 145
BSNT_00529___ 137 TTGGATTTATTCCATCTATTTTGTTAACGATTATTTTCGCCGCACTTGCG 186
|.||.|||.||||..|..||.||||.||..|||||||.|||||.||.|..
BL01558___opu 146 TGGGTTTTGTTCCGCCGGTTATGTTGACCGTTATTTTTGCCGCGCTCGTC 195
BSNT_00529___ 187 TGGTGGATCAGTACAAGGGGAATTGCGTTATTTACGTTGATTGGATTCCT 236
|||..||||||.|.|||.||.||||||.|.|||||.||.||.|||||..|
BL01558___opu 196 TGGCTGATCAGCAAAAGAGGCATTGCGCTGTTTACTTTAATCGGATTTTT 245
BSNT_00529___ 237 CCTGATCGATTATTTAGGTTATTGGGACCCAATGCTGCAAACATTGGCGC 286
..|.||.|||||||||||.|||||||||.|.|||||.||.||||||||||
BL01558___opu 246 TATCATTGATTATTTAGGATATTGGGACGCCATGCTCCAGACATTGGCGC 295
BSNT_00529___ 287 TTGTGTTGACATCTGTGATTATTTCGATTGTGGTCGGGGTTCCGATCGGA 336
||||..|.|||||.||..|.|||||..|..|..||||..|||||.|||||
BL01558___opu 296 TTGTCGTCACATCCGTTCTGATTTCTGTCATTATCGGCATTCCGGTCGGA 345
BSNT_00529___ 337 ATTTGGGCGTCTCAGAAAG-AAACGGTTCGCCGTATTGTAACGCCAATTC 385
||.||||..||.|| |||| ||||||||||..|..|.||.|||||.||.|
BL01558___opu 346 ATCTGGGGCTCCCA-AAAGAAAACGGTTCGGAGAGTCGTTACGCCCATCC 394
BSNT_00529___ 386 TTGATTTAATGCAGACAATGCCTGCTTTCGTATATCTATTGCCGGCGATT 435
||||.|||||||||||||||||.||.|||||.|||.||.|.|||||.||.
BL01558___opu 395 TTGACTTAATGCAGACAATGCCGGCATTCGTTTATTTACTTCCGGCCATC 444
BSNT_00529___ 436 TTCTTCTTTAACATCGGTGTTGTGCCGGGTGTTGTTGCATCTGTTATCTT 485
|||||.||.||.|||||.|||||||||||||||||.||.||.||||||||
BL01558___opu 445 TTCTTTTTCAATATCGGGGTTGTGCCGGGTGTTGTCGCTTCCGTTATCTT 494
BSNT_00529___ 486 CGCGATGCCGCCGACAATCCGCATGACTGTTC-TCGGTATTAAACAAGTG 534
.||||||||.|||||||||||.||||| |.|| |.||.||..|.||.|||
BL01558___opu 495 TGCGATGCCTCCGACAATCCGGATGAC-GATCTTAGGGATCCAGCAGGTG 543
BSNT_00529___ 535 CCGGCGGATCTGATTGAAGCAACTGAGGCATTCGGTTCTACAAC-AGCTC 583
||.|..||||||||||||||.||.||.|||||.|||||.||.|| ||| |
BL01558___opu 544 CCTGAAGATCTGATTGAAGCTACAGAAGCATTTGGTTCAACGACAAGC-C 592
BSNT_00529___ 584 AGCGTTTGTTTAAAGTTCAGCTTCCGCTTGCGACAAAAACGATTTTGGCC 633
||||..|.||||||||.|||||.|||||.|||||.|||||.|||.|||||
BL01558___opu 593 AGCGGCTCTTTAAAGTGCAGCTGCCGCTCGCGACGAAAACCATTCTGGCC 642
BSNT_00529___ 634 GGAATTAACCAGAGCATCATGCTTGCGTTATCAATGGTTGTTATCGCCGC 683
||.||.||.||.||||||||||||||.||.||||||||.|||||.||..|
BL01558___opu 643 GGTATCAATCAAAGCATCATGCTTGCTTTGTCAATGGTCGTTATTGCATC 692
BSNT_00529___ 684 AATGGTCGGTGCACCGGGACTTGGTTCTGAAGTATACAGTGCCGTTACAC 733
||||||.||.||.||.|||||.||....|||||.|||.|.||.||.||.|
BL01558___opu 693 AATGGTAGGCGCGCCCGGACTCGGAGAAGAAGTTTACCGGGCTGTGACCC 742
BSNT_00529___ 734 AGCTGAAAACCGGGGT--CGGAGTAGAGGCCGGTATCGCCATCGTTATCG 781
|||||.|||| |||| |||.|||||..||||..|.||.||.|||||..
BL01558___opu 743 AGCTGCAAAC--GGGTACCGGTGTAGAAACCGGACTTGCGATTGTTATTA 790
BSNT_00529___ 782 TTGCCATTACG--CTGGACCGTATTACTCAAAATATTAAAGTGAAGAAGA 829
||||.|| || ||.|||||..||||.||||||||.|||.||||.|||
BL01558___opu 791 TTGCGAT--CGTACTTGACCGGGTTACACAAAATATAAAATTGAAAAAG- 837
BSNT_00529___ 830 AAAGCAGGGGGAATGCCTGA 849
||||||||||||||.|.|
BL01558___opu 838 --AGCAGGGGGAATGCATAA 855
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