Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00528 and BL01559
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:09
# Commandline: needle
# -asequence dna-align/BSNT_00528___opuAA.1.5803.seq
# -bsequence dna-align/BL01559___opuAA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00528___opuAA-BL01559___opuAA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00528___opuAA-BL01559___opuAA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00528___opuAA
# 2: BL01559___opuAA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1299
# Identity: 973/1299 (74.9%)
# Similarity: 973/1299 (74.9%)
# Gaps: 93/1299 ( 7.2%)
# Score: 3706.0
#
#
#=======================================
BSNT_00528___ 1 ATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTCTCTAA 50
||||.|..|||.||.||.|.|||.|||||||||||.||.|||||.||.||
BL01559___opu 1 ATGAATTCAGACGAAAAGCGAATCAAGATAAAAGTAGAAAAAGTGTCCAA 50
BSNT_00528___ 51 GATTTTTGGGAAACAA-ACAAAGAAGGCAGTTCAAATGCTTGCCAACGGA 99
|.|.||.|||||.|| ||||||||.|||...||..||||||||.|.||.
BL01559___opu 51 -AGTGTTTGGAAAGAATACAAAGAAAGCAACGCAGCTGCTTGCCGATGGC 99
BSNT_00528___ 100 AAGACAAAAAAAGAGATCCTGAAAGCAACCGGATCAACCGTTGGGGTTAA 149
||.||.||||||||.||.|||||||.||||||..|.|||||.|||||.||
BL01559___opu 100 AAAACCAAAAAAGAAATTCTGAAAGAAACCGGGGCGACCGTCGGGGTGAA 149
BSNT_00528___ 150 TCAGGCAGATTTTGAAGTATATGATGGTGAGATATTTGTCATCATGGGTC 199
.||.|||||||||...||.|||||.|||||||||||||||||||||||||
BL01559___opu 150 CCAAGCAGATTTTAGCGTGTATGAAGGTGAGATATTTGTCATCATGGGTC 199
BSNT_00528___ 200 TATCAGGGAGCGGTAAATCAACTTTAGTACGGATGTTAAACCGGCTTATT 249
||||||||||||||||||||||.||.||.|||.|.||||||||..|.|||
BL01559___opu 200 TATCAGGGAGCGGTAAATCAACCTTGGTGCGGCTTTTAAACCGTTTGATT 249
BSNT_00528___ 250 GAACCGACTGCCGGAAATATTTACATTGATGGTGACATGATAACAAATAT 299
|||||||||||.|||.||.|..||||.|||||||||||||||||||||||
BL01559___opu 250 GAACCGACTGCAGGACATGTGCACATAGATGGTGACATGATAACAAATAT 299
BSNT_00528___ 300 GTCTAAAGACCAGCTCCGGGAAGTCCGCCGGAAGAAAATCAGCATGGTCT 349
|||.|||||||||||.||||||.|||||||.||.||||||||||||||||
BL01559___opu 300 GTCCAAAGACCAGCTTCGGGAAATCCGCCGAAAAAAAATCAGCATGGTCT 349
BSNT_00528___ 350 TCCAAAAGTTCGCTCTGTTCCCGCACAGAACGATACTTGAAAACACAGAA 399
|.|||||.|||||||||||.|||||||.|||.||.||||||||||||||.
BL01559___opu 350 TTCAAAAATTCGCTCTGTTTCCGCACAAAACAATTCTTGAAAACACAGAG 399
BSNT_00528___ 400 TACGGACTGGAACTTCAAGGTGTAGACAAACAAGAGCGGCAGCAAAAAGC 449
||||||.|||||||.|||...||.||.|||..|.|.||.|.||.||||||
BL01559___opu 400 TACGGATTGGAACTGCAAAAAGTGGATAAAAGAAAACGCCGGCTAAAAGC 449
BSNT_00528___ 450 GCTTGAGTCTCTTAAGCTCGTCGGGCTCGAAGGATTTGAACACCAATATC 499
..|.||.||..|.|||||.||||||||.|||||.|.||||||.|||||||
BL01559___opu 450 TATGGAATCATTAAAGCTTGTCGGGCTTGAAGGGTATGAACAGCAATATC 499
BSNT_00528___ 500 CAGATCAGCTTTCCGGCGGGATGCAGCAGCGTGTCGGCCTTGCCCGCGCG 549
|.||||||||...||||||||||||||||||.|||||.|||||||||||.
BL01559___opu 500 CGGATCAGCTGAGCGGCGGGATGCAGCAGCGCGTCGGGCTTGCCCGCGCA 549
BSNT_00528___ 550 TTGACAAATGATCCGGACATCCTTCTGATGGACGAAGCGTTCAGTGCGCT 599
|||||.||.|||||||||||.||.||||||||||||||||||||.|||||
BL01559___opu 550 TTGACGAACGATCCGGACATTCTGCTGATGGACGAAGCGTTCAGCGCGCT 599
BSNT_00528___ 600 TGATCCACTGATTCGTAAAGATATGCAGGATGAGCTTCTTGATCTTCACG 649
|||.||.||||||||.||.||||||||||||||.||.||.|||.|.||.|
BL01559___opu 600 TGACCCCCTGATTCGCAAGGATATGCAGGATGAACTCCTCGATTTGCATG 649
BSNT_00528___ 650 ATAAT--GTCGGAAAAACAATTATCTTTATTACGCATGA-CTTGGACGAA 696
||| ||.||||||||.|||||.||.||.||.||||| ||| ||.|||
BL01559___opu 650 --AATCAGTAGGAAAAACGATTATTTTCATCACCCATGATCTT-GATGAA 696
BSNT_00528___ 697 GCGTTGCGGATCGGCGACAGAATTGTCCTAATGAAGGACGGCAACATCGT 746
|||.||.|.||||||||..||||.|...|.|||||.|||||.||||||||
BL01559___opu 697 GCGCTGAGAATCGGCGATCGAATCGCATTGATGAAAGACGGAAACATCGT 746
BSNT_00528___ 747 TCAAATCGGCACGCCTGAAGAAATCCTGATGAATCCATCTAACGAATATG 796
|||||||||.|||||.|||||.|||.|.|||||.||.||.||||||||||
BL01559___opu 747 TCAAATCGGTACGCCGGAAGAGATCTTAATGAACCCGTCGAACGAATATG 796
BSNT_00528___ 797 TTGAGAAATTCGTCGAAGATGTTGATTTGTCTAAAGTCCTCACAGCAGGC 846
||||.||||||||.||||||||.||.||.||||||||.||.||.||.|||
BL01559___opu 797 TTGAAAAATTCGTTGAAGATGTCGACTTATCTAAAGTGCTGACGGCCGGC 846
BSNT_00528___ 847 CACATTATGAAACGCGCTGAAACAGTGCGGATTGATAAAGGGCCTCGCGT 896
||||||||||||||.||||||||.|||||..|.||.||||||||.|||||
BL01559___opu 847 CACATTATGAAACGGGCTGAAACCGTGCGCGTAGACAAAGGGCCGCGCGT 896
BSNT_00528___ 897 AGCATTGACACTGATGAAAAACCTTGGAATTTCTTCAATTTATGCAGTGG 946
.|||.||||.||||||||||||||.||.||.||.||.||||||||.||.|
BL01559___opu 897 TGCACTGACGCTGATGAAAAACCTGGGGATCTCCTCGATTTATGCTGTTG 946
BSNT_00528___ 947 ATAAACAAAAGAAATTGTTAGGTGTTATCT------ATGCGTCTGATG-- 988
|.|||||.|| |||| || .|.|||| ||||
BL01559___opu 947 ACAAACACAA--------TAGG------CTCCTCGGCTCCGTC-GATGCT 981
BSNT_00528___ 989 --------------------CGAAAAAAGC----GGCT---GAGTCTGAT 1011
|||||||||| .||| |||
BL01559___opu 982 GAAACAGCGAAGAAAGCAGCCGAAAAAAGCCAGACGCTGGAGAG------ 1025
BSNT_00528___ 1012 TTGTCACTTCAAGACATCTTGAATACAGAATTTACGACTGTACCAGAGAA 1061
.||||..||||| ||||.|.||.||.|||..||||||
BL01559___opu 1026 -CGTCATCTCAAG-------------AGAAATCACAACCGTAGAAGAGAA 1061
BSNT_00528___ 1062 TACGTAT---CTGACTGAGATTTTTGACGTTGTGTCTGATGCGAATATTC 1108
| || | |||||.||.||.|||||..|.||.||||||||.|..||||
BL01559___opu 1062 T--GT-TGTCCTGACGGATATCTTTGAATTGGTCTCTGATGCCAGCATTC 1108
BSNT_00528___ 1109 CAATTGCGGTTGTGGATGAGAAGCAAAGAATGAAAGGAATTGTCGTAAGA 1158
|.|||||.||.||.|||||.||.||..|.||||||||.||..||||.|.|
BL01559___opu 1109 CGATTGCTGTCGTCGATGAAAAACAGCGGATGAAAGGGATCATCGTCAAA 1158
BSNT_00528___ 1159 GGCGCGCTGATTGGCGCACTTGCCGGCAATAACGAGTATATCAATGCTGA 1208
|||||..|.||.||.||.||||||||.|||.||..||||||.||||
BL01559___opu 1159 GGCGCATTAATCGGAGCGCTTGCCGGAAATGACCGGTATATTAATG---- 1204
BSNT_00528___ 1209 AGGCACTAAAGAACAAACACAAGATCCTTCTGCACAGGAGGTGAAGTAA 1257
||.|.||||.|.|.||.||..||..|...||||||||||..|||
BL01559___opu 1205 -----CTCATGAACCAGCCCATGAAGCTGTTATTCAGGAGGTGAGATAA 1248
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