Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03673 and BL01565
See
Amino acid alignment /
Visit
BSNT_03673 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:41
# Commandline: needle
# -asequence dna-align/BSNT_03673___yqxM.1.5803.seq
# -bsequence dna-align/BL01565___yqxM.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03673___yqxM-BL01565___yqxM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03673___yqxM-BL01565___yqxM.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03673___yqxM
# 2: BL01565___yqxM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 893
# Identity: 454/893 (50.8%)
# Similarity: 454/893 (50.8%)
# Gaps: 295/893 (33.0%)
# Score: 1103.0
#
#
#=======================================
BSNT_03673___ 1 ATGTTTCGATTGTTTTACAATCAGCAAA--AGGCGAAGACGAAA------ 42
|||||.|||||.|.| |.|| |||.||.|.|||||
BL01565___yqx 1 ATGTTCCGATTATCT---------CGAACTAGGAGATGCCGAAAAAGAGC 41
BSNT_03673___ 43 CTGAAA----------GTT---------CTGCTTATCTTTCAGCTTTCAG 73
|.|||| ||| |||||.|||.|..|.||.|
BL01565___yqx 42 CGGAAAAAACATTATCGTTTTTCAAACGCTGCTGATCATATACCTGT--- 88
BSNT_03673___ 74 TCATT---TT---CAGTCTGACTGCCGCAATATGCTTACAATTTTCCGAT 117
|.||| || .||||.| |||.|.|| ||
BL01565___yqx 89 TAATTGGATTGGGGAGTCAG-CTGTCACA----GC--------------- 118
BSNT_03673___ 118 GATACAAGCGCTGCTTTTCATGATATTGAAACATTTGATGTCTCACTTCA 167
||||||.|||..|.|||||||||.|.||||||
BL01565___yqx 119 -ATACAAACGCATCATTTCATGATGTGGAAACA----------------- 150
BSNT_03673___ 168 AACGTGTAAAGACTTTCAGCAT-ACAGATAAAAACTGC------------ 204
|.|||||| ||| ||.|||.|.||
BL01565___yqx 151 --------------TACAGCATGACA-ATGAAAGCGGCCTCAACTTTTCC 185
BSNT_03673___ 205 -CATTATGATAAACGCTGGGATCAAAGTGATTTGCACATATC-AGATCAA 252
||..||||.||.|..|||||....||.||||||.|..| || |.|.||.
BL01565___yqx 186 TCAAGATGAGAAGCAGTGGGACGGGAGCGATTTGAAGCT-TCAAAAGCAG 234
BSNT_03673___ 253 ACGGATACGAAAGGCACTGTATGCTCACCTTTCGCCTTATTTGCTGTGCT 302
|||.|.||||||||.||.||.||..||||..|..|.||.|||||
BL01565___yqx 235 ACGAAGACGAAAGGAACGGTCTGTGCACCGCTGACATTGTTTGC------ 278
BSNT_03673___ 303 CGAAAATACAGGTGAGAAACTTAAGAAATCAA-------------AGTGG 339
|.|||| .|.||||....|.|.|||| |.|||
BL01565___yqx 279 --AGAATA-----TAAAAACCGCGGCAGTCAAATCGCCGACTCTGAATGG 321
BSNT_03673___ 340 AAGTGGGAGCTTCATAAGCTTGAAAATGCCCGCAAACCGTTAAAGGATGG 389
|||||||||||||||||.||.|...||.||...||.|||.||.||||.||
BL01565___yqx 322 AAGTGGGAGCTTCATAAACTCGGTCATTCCAAAAAGCCGCTAGAGGACGG 371
BSNT_03673___ 390 GAACGTGATCGAAAAAGGATTTGTCTCCAA---------TCAAATCGGCG 430
||..||||||||.||||| .||.|.||| ..|||.|.||
BL01565___yqx 372 GACTGTGATCGATAAAGG---CGTGTTCAAAAAAGAAGCCGAAAGCAGC- 417
BSNT_03673___ 431 ATTCACTTTATAAAATTGAGACCAAG-----AAAAAAATGAAACCCGGCA 475
||..||...||| |||.|.||| |..||||.|| ||..
BL01565___yqx 418 ATCTACCGGATA-----GAGTCAAAGCGGGCAGCAAAAGGA-----GGGC 457
BSNT_03673___ 476 TTTATGCATTTAAAGT-ATATAAACCGGCAGGCTACCCGG------CAAA 518
|.||.||.||||||.| || .|.|||.|.||||.|.||.| .|||
BL01565___yqx 458 TATACGCTTTTAAATTGAT-CAGACCTGAAGGCCATCCAGATGTTAAAAA 506
BSNT_03673___ 519 CGGCAGTACATTTGA-GTGGTC---------GGAGCCT-ATGACGCTTGC 557
.|||| .||.|||.| .||||| |||||.| |.||| |||
BL01565___yqx 507 GGGCA-AACCTTTCATTTGGTCAAATGTAATGGAGCTTCAAGAC---TGC 552
BSNT_03673___ 558 AAAATGCGATGAAAAACCGA---CTGTCCCTAAAAAAG---------AAA 595
|| .||.||||.||||| || |||||||||| ||.
BL01565___yqx 553 AA----TGAAGAAACACCGAAGCCT---CCTAAAAAAGCTTCAGCAAAAC 595
BSNT_03673___ 596 CAAAGTCGGACGTCAAA---AAGGAGAATGAAACAACACAAA-------- 634
||||| |||| || .|||.|.|||||||.||||
BL01565___yqx 596 CAAAG--------CAAACTGAA-CAGACTCAAACAACGCAAAAGTCTGAA 636
BSNT_03673___ 635 -AGGATATACAGGAAAAAACAATGAAAGAAGAAACATCTCA-AGAAGCTG 682
||||||||.||||||.|.|||.|.| || .|||.|.|
BL01565___yqx 637 CAGGATATAGAGGAAACACCAAAGGA-------------CAGTGAATCCG 673
BSNT_03673___ 683 TAACCAAAGAAAAT-GAAACTCAATCAGACCAGAAG-----------GAA 720
||...||||||||| |||| ||||| |||
BL01565___yqx 674 TAGATAAAGAAAATAGAAA------------AGAAGATAATTCATTAGAA 711
BSNT_03673___ 721 AGCGGGGAAGAG-GATGAAAAAAGCAATGAAGCTGATCAGTAA 762
||||||||||.| .||||
BL01565___yqx 712 AGCGGGGAAGCGTCATGA------------------------- 729
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.