Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03685 and BL01571
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:42
# Commandline: needle
# -asequence dna-align/BSNT_03685___comGB.1.5803.seq
# -bsequence dna-align/BL01571___comGB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03685___comGB-BL01571___comGB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03685___comGB-BL01571___comGB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03685___comGB
# 2: BL01571___comGB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1127
# Identity: 652/1127 (57.9%)
# Similarity: 652/1127 (57.9%)
# Gaps: 247/1127 (21.9%)
# Score: 1686.0
#
#
#=======================================
BSNT_03685___ 0 -------------------------------------------------- 0
BL01571___com 1 ATGAAGATTAAAATGAAGTGGCCTGTCCGGGAACAGGCGGACCTTCTGAA 50
BSNT_03685___ 1 -------------ATGACTGC-GGGCGGATATACGCTTCTGGATGGATTA 36
|||| ||| |.|.||.||||||.||.||||||..|||
BL01571___com 51 AAAACTAGGAGACATGA-TGCAGAGTGGCTATACGATTTTGGATGCTTTA 99
BSNT_03685___ 37 CGCCTGATGGAACTTCAGATGAAT--AAGAGGCAG-GCGG--CTGAC--T 79
.|..||.||.||.|.||..||||| ||||.|.|| |||| ||||| |
BL01571___com 100 AGTATGCTGAAATTGCAATTGAATGAAAGACGAAGAGCGGATCTGACATT 149
BSNT_03685___ 80 TGACTGGTTCGGT-------CACTTGTTTGAGGGAAGGGGCTCC-GTTTT 121
|| ||.| | |||..||||||..||| ||.||
BL01571___com 150 TG-------CGATGGAGAAGC-------TGACAGAAGGGTGTCCTGTGTT 185
BSNT_03685___ 122 ATCAAGTACT---AAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATT 168
||||||.|| ||.|| |.||.|||||.|||||.||.||....|||
BL01571___com 186 -TCAAGTTCTTGAAATGA---TTTCCTTTCACAAGGATGCTGTCACCATT 231
BSNT_03685___ 169 TGTTATTTTGCTGAAACA-CATGGTGAA-CTGCCTGCTTCCATGATCCAG 216
..|||.|||||.| |||| ||.|| ||| .||||...|.||.|.|..|||
BL01571___com 232 GTTTACTTTGCCG-AACAGCACGG-GAATTTGCCATTTGCCTTTAGGCAG 279
BSNT_03685___ 217 AGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGACCAGCTGAAAAG 266
||||||||||||||..|.||.||.||.||.|| .||| |||||.
BL01571___com 280 AGCGGAGAGCTGCTTCACCGCAAGATCGCTCA-------AAGC-GAAAAA 321
BSNT_03685___ 267 TGT-------GCTGC--GCTATCCGCTT-TTCCTCATCTTTACGGTC-GC 305
| | ||.|| |.|| ||.||| ||..|..|.||.|||||| ||
BL01571___com 322 T-TAAAGAAAGCCGCCAGATA-CCCCTTGTTTTTAGTTTTAACGGTCTGC 369
BSNT_03685___ 306 TGTCATGTTTTATATGTTACAGTCCATCATCA----TTCCTCAGTTTTCC 351
|||||..|.|.|||..|..| ||||.|| ||||.||.||||||
BL01571___com 370 -GTCATCATCTCTATTATGAA----ATCAGCAATAGTTCCGCAATTTTCC 414
BSNT_03685___ 352 GGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGA----TA 397
|..||||||.||||||||||..|.|||||.||...|.||| ||| .|
BL01571___com 415 GCCATCTATGAATCGATGAACGTTGAAACGTCTTTTGCAA-CGACTCTCA 463
BSNT_03685___ 398 TGCTTTT-TGCTTTTTTTC-AGCATATTGATCTTGTGATCATTTT----- 440
| ||||| || ||||| |.||..||.||||| ||||
BL01571___com 464 T-CTTTTATG----TTTTCGATCACTTTTATCTT-------TTTTTCGCG 501
BSNT_03685___ 441 --------GCTTGTTCTTTTTACAGCAG--GTATCGGGATTTATTATTGG 480
|||.| ||.|.|||| .|||| ..|.||||||
BL01571___com 502 GGACTGCCGCTGG------TTGCCGCAGCTCTATC--CCTCTATTAT--- 540
BSNT_03685___ 481 CTTGTGTT--------------------TAAGAAAAAATCACCTGCCCGG 510
.|||||| .||||.|||||..|||
BL01571___com 541 -CTGTGTTCATTCCGCCATAAACCTCCAGAAGACAAAATGGCCT------ 583
BSNT_03685___ 511 CAAATGCTGATTTGTATCAGGATTCCTTTGGTTGG--AAAGCTTGTAAAG 558
|.||.||| |..|||||.|||.|.|| |||.|| |.||.
BL01571___com 584 ----TTCTCATT------ACAATTCCCTTGCTGGGCCAAACCT--TCAAA 621
BSNT_03685___ 559 CTGTTTAACAGCTACTTTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATC 608
||.||.||||||||.|||||.||..|.|||||.||||..|||||..||.|
BL01571___com 622 CTATTCAACAGCTATTTTTTATCGCTCCAGCTGAGCAATCTTTTGCAAGC 671
BSNT_03685___ 609 AGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACGTTTC 658
.||.||.||..|.||||||||..|.||.||||||.||...||..|||||.
BL01571___com 672 GGGTCTGTCTGTATATGACAGTTTAAAAGCATTTGAAAGCCAGCCGTTTT 721
BSNT_03685___ 659 T-CCCTTTC-TACCGCTGCGAGGCTGAA-CAATTGATTGAACGGCT--AA 703
| |..|||| ||....| ||.|| ||| |..|||||.||.||||| ||
BL01571___com 722 TACGATTTCATAAAAAT--GAAGC-GAAGCGCTTGATCGAGCGGCTGAAA 768
BSNT_03685___ 704 AAGCCGGTGAGTCAATTGAATCCGCTATTTG-TGGAAGCCCTTTTTATGA 752
.||..||.||||| ||.|.|.|.|..|.| .|||...||.||||||||
BL01571___com 769 CAGGGGGAGAGTC---TGGAGCAGATGCTGGCCGGACATCCGTTTTATGA 815
BSNT_03685___ 753 AACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGG 802
||.|||||||.||||.|...|..|.||||||||.||.|..||.|..||..
BL01571___com 816 AAATGATTTAGCAAAGGCTGTTGCACACGGCCAACTAAATGGGCACTTAT 865
BSNT_03685___ 803 ATCGGGAGCTTTTCACATACAGCCAATTCAT-ATTACAGCGGCTGGAACA 851
|..|.|||||.|...||||.||.||.||..| ||| .|||||||.||| |
BL01571___com 866 ACAGAGAGCTGTATTCATATAGTCAGTTTTTGATT-GAGCGGCTTGAA-A 913
BSNT_03685___ 852 CAAAGCGC--AAAAATGGACAGGCATCCTTCAGCCAATGATTTATGGATT 899
.|||| || ||||||||||||||.|..|.||||||.|||||||.||
BL01571___com 914 GAAAG-GCCGAAAAATGGACAGGCCTGATCCAGCCATTGATTTACGG--- 959
BSNT_03685___ 900 TGTT----GCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCT 945
|.| ||.||||||||.|||.||.|.|||||.||.||||||.||||.
BL01571___com 960 -GCTAACCGCGGCGATGATATTAATTCTTTATTTGTCCATGCTTTTGCCA 1008
BSNT_03685___ 946 ATGTATCAGATGATGAATCAAATGTGA 972
||||||||.||||||||.||..|.|.|
BL01571___com 1009 ATGTATCAAATGATGAACCAGCTATAA 1035
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