Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04969 and BL01579
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:09
# Commandline: needle
# -asequence dna-align/BSNT_04969___fhuD.1.5803.seq
# -bsequence dna-align/BL01579___fhuD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04969___fhuD-BL01579___fhuD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04969___fhuD-BL01579___fhuD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04969___fhuD
# 2: BL01579___fhuD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 954
# Identity: 725/954 (76.0%)
# Similarity: 725/954 (76.0%)
# Gaps: 12/954 ( 1.3%)
# Score: 2703.5
#
#
#=======================================
BSNT_04969___ 1 ATGACCCATATATACAAG---AAAC--TCGGAGCCGCGTTTTTTGCCCTG 45
.||| ||||..||| |.|| |||..||.||||.|||||..||.
BL01579___fhu 1 GTGA-----ATATTAAAGGTAAGACGATCGCGGCAGCGTGTTTTGTACTA 45
BSNT_04969___ 46 TTATTGATTGCAGCGCTGGCAGCCTGCGGGAATAACTCAGAAAGCAAAGG 95
||||||||.|||||..||.||||.|||||.|||.|..||||.|||||||.
BL01579___fhu 46 TTATTGATCGCAGCATTGACAGCATGCGGCAATCAAACAGAGAGCAAAGA 95
BSNT_04969___ 96 TTCTGCCTCTGATTCAAAAGGCGCAGAAACCTTTACATACAAGGCTGAAA 145
||||.|.|||.|.||||||.|||.||||||..||||||||||||||||||
BL01579___fhu 96 TTCTTCTTCTAAATCAAAAAGCGAAGAAACGATTACATACAAGGCTGAAA 145
BSNT_04969___ 146 ACGGAAATGTAAAAATCCCGAAGCATCCTAAACGGGTGGTTGTCATGGCA 195
||||||..||.|||.|.|||||||||||.||.|||||||||||||||||.
BL01579___fhu 146 ACGGAACGGTTAAAGTGCCGAAGCATCCGAAGCGGGTGGTTGTCATGGCT 195
BSNT_04969___ 196 GACGGCTATTACGGCTACTTCAAAACACTCGGCATCAACGTTGTCGGTGC 245
||||..||||.||||||.|||||.||||||||..||||.||.||.||.||
BL01579___fhu 196 GACGATTATTTCGGCTATTTCAAGACACTCGGTCTCAATGTAGTGGGCGC 245
BSNT_04969___ 246 GCCTGAGAATGTATTTAAAAACCCTTACTACAAAGGAAAAACCGACGGCG 295
.|||||.|..||.||.||.||.|||||.|.|||.||.||||||||.||.|
BL01579___fhu 246 CCCTGACAGGGTTTTCAAGAATCCTTATTTCAAGGGGAAAACCGATGGTG 295
BSNT_04969___ 296 TCGA-AAACATCGGAGACGGCACTTCGGTTGAAAAGGTCATTGATTTGAA 344
| || ||||||.||.||.||.|.|||.|.|||||||||.|||.|.||.||
BL01579___fhu 296 T-GACAAACATAGGTGAAGGAAATTCTGCTGAAAAGGTTATTCAATTAAA 344
BSNT_04969___ 345 CCCTGACCTGATTATCGTCTGGACAACACAGGGCGCTGATATTAAAAAGC 394
.||.|||.|||||.||||.|||||.||.||.|||||||||||..||||||
BL01579___fhu 345 ACCGGACTTGATTGTCGTATGGACGACCCAAGGCGCTGATATCGAAAAGC 394
BSNT_04969___ 395 TTGAAAAAATTGCGCCGACTGTCGCAGTAAAATACGATAAGCTCGACAAC 444
|.||||||||.||.|||||.|||||..|.|||||.||.|..||..|.|.|
BL01579___fhu 395 TGGAAAAAATCGCTCCGACGGTCGCGTTGAAATATGACAGTCTGAATAGC 444
BSNT_04969___ 445 ATCGAACAGCTGAAAGAATTTGCAAAAATGACGGGAACTGAAGATAAAGC 494
|..||||.||||||.||.||.|||||||||||.||.|||||||||.||||
BL01579___fhu 445 ACTGAACGGCTGAAGGATTTCGCAAAAATGACAGGCACTGAAGATCAAGC 494
BSNT_04969___ 495 TGAAAAATGGCTGGCCGAGTGGGATAAAAAAGTTGCGGCCGCTAAAACAA 544
.||.|||||||||||.||.|||||.||||||||||||||.||.|||.|||
BL01579___fhu 495 GGAGAAATGGCTGGCTGAATGGGACAAAAAAGTTGCGGCGGCCAAATCAA 544
BSNT_04969___ 545 AAATCAAAAAAGCGGTCGGTGACAAAACCATTTCCATTATGCAAACGAAC 594
||.|..|||||||.|||||..|||||||..||||||||||||||||.|||
BL01579___fhu 545 AAGTTCAAAAAGCTGTCGGGAACAAAACGGTTTCCATTATGCAAACTAAC 594
BSNT_04969___ 595 GGAAAAGACATTTACGTATTTGGTAAAGACTTTGGAAGAGGCGGAAGCAT 644
||.|||||.||.|..|||||.||..|..|.||.|||||.||.||||||||
BL01579___fhu 595 GGTAAAGAAATCTTTGTATTCGGCGATCAATTCGGAAGGGGAGGAAGCAT 644
BSNT_04969___ 645 CATTTACAAAGACCTCGGCCTGCAGGCTACAAAGCTGACAAAAGAAAAAG 694
..|||||.||||.||||||.|..||||.||||||||||||||.|||||||
BL01579___fhu 645 TGTTTACCAAGATCTCGGCTTAAAGGCGACAAAGCTGACAAAGGAAAAAG 694
BSNT_04969___ 695 CCATTGACCAGGGGCCAGGTTATACAAGTATTTCATTAGAGAAGCTCCCT 744
|.||.|||.|.||.||.||.||.||.||.|||||.|||||.|||||.|||
BL01579___fhu 695 CAATCGACGAAGGCCCGGGCTACACGAGCATTTCCTTAGAAAAGCTGCCT 744
BSNT_04969___ 745 GATTTCGCCGGGGATTACATTTTCGCGGGCCCATGGCAATCAGGCGGTGA 794
||||||||.||.|||||.||.||....||.||.|||.|||||.||||.||
BL01579___fhu 745 GATTTCGCTGGAGATTATATATTTATAGGACCTTGGGAATCAAGCGGAGA 794
BSNT_04969___ 795 TGATGGCGGCGTATTTGACAGCTCCATTTGGAAGAACCTGAATGCCGTTA 844
.||..|||.|||..||.|.|..|||||||||||||||||....||.||.|
BL01579___fhu 795 CGACAGCGCCGTGCTTAATACATCCATTTGGAAGAACCTTGGGGCGGTCA 844
BSNT_04969___ 845 AAAATGGCCATGTATACAAGATTGATCCGATTGGCTTCTATTTCACAGAC 894
||||....|||||.||.||.||.||.||..|.|||||||||||..|.||.
BL01579___fhu 845 AAAACCAACATGTCTATAAAATCGACCCTGTCGGCTTCTATTTTTCCGAT 894
BSNT_04969___ 895 CCGATTTCATTAGAAGGACAACTGGAGTATATTACGGAAAGCTTGACTAA 944
||||||||||||||.||.||.||.||.|.||||||.||||.|||.||.||
BL01579___fhu 895 CCGATTTCATTAGAGGGCCAGCTCGAATTTATTACAGAAAACTTAACAAA 944
BSNT_04969___ 945 ATAA 948
|||.
BL01579___fhu 945 ATAG 948
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