Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02392 and BL01598
See
Amino acid alignment /
Visit
BSNT_02392 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:56
# Commandline: needle
# -asequence dna-align/BSNT_02392.1.5803.seq
# -bsequence dna-align/BL01598___yknU.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02392-BL01598___yknU.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02392-BL01598___yknU.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02392
# 2: BL01598___yknU
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1797
# Identity: 808/1797 (45.0%)
# Similarity: 808/1797 (45.0%)
# Gaps: 696/1797 (38.7%)
# Score: 2502.0
#
#
#=======================================
BSNT_02392 1 ATGGAGACATTTAAAAGATTAAAA-ATGTATTATTGGCCGTACAGAAAAG 49
||||||.|..||||||.|.||||| || |.|||||||||.||.|.||||.
BL01598___ykn 1 ATGGAGTCCCTTAAAAAACTAAAAGAT-TTTTATTGGCCTTATAAAAAAA 49
BSNT_02392 50 TGTTTATGTGGTCGCTTCTAGCCATGCTTTTGATGACAGCAATTACTGTC 99
|||||.|.||||||.||....|.||||||.|.|||||.||.|||||.||.
BL01598___ykn 50 TGTTTTTATGGTCGATTGCGTCGATGCTTCTAATGACGGCGATTACCGTT 99
BSNT_02392 100 GTTTATCCGATTATCCTGCAAATTACGATTGATGAGATCGTACTGGGACG 149
||||||||||||||.||||||||.||.||||||||..|..|.||.|| ||
BL01598___ykn 100 GTTTATCCGATTATTCTGCAAATGACAATTGATGAAGTAATTCTCGG-CG 148
BSNT_02392 150 GCAGTAT-CAGCTTGCGGC--GTGGGTCAGCTTAGGATTTATTGCGGTAA 196
| |..|| |.|.||| |.| .|||.|||||.|.||.||.||.||.||.|
BL01598___ykn 149 G-AAAATACGGTTTG-GTCATATGGATCAGCCTCGGGTTCATCGCTGTCA 196
BSNT_02392 197 TGGTTTTGAAAGGAATGGCTACCTTTTTTCATCAGTATTTAGGTGATATG 246
|||....|||.||....||.||.|||||||||||||||.|.||.||||||
BL01598___ykn 197 TGGCGGCGAAGGGCGCAGCCACTTTTTTTCATCAGTATCTCGGAGATATG 246
BSNT_02392 247 TTCGGGATCAAATCCGTTTATCGGCTGAGAAATGGTCTGTATGAAAAACT 296
|||||.||....||.||.||.|||.|.|||||.|..|||||||..|||.|
BL01598___ykn 247 TTCGGAATTCGCTCTGTCTACCGGTTAAGAAAAGAGCTGTATGCGAAATT 296
BSNT_02392 297 GCAGCGGCTTTCTTTTTCTTACTATGATAACGCGAAAACAGGAGATTTGA 346
||||||.||..|.||....||.||.||.|.|||.|||||.||||||||.|
BL01598___ykn 297 GCAGCGTCTGCCGTTCAAATATTACGACAGCGCTAAAACGGGAGATTTAA 346
BSNT_02392 347 TGTCCAGGCTGACTGCTGATGTTGAAGGGCTTC-GTTTTTTCTTATCATA 395
||||.|||||.||.||.||.||.||| |||.|| |.||.||.|||||.|.
BL01598___ykn 347 TGTCAAGGCTTACGGCGGACGTCGAA-GGCATCAGATTCTTTTTATCTTT 395
BSNT_02392 396 CGGTCTCGCTGAGCTCATTCGATTCGGCCTGCTGGTAGCCATCAGCCTGT 445
|||..|.||||||...||||||||...||||||.||..|..||||.||||
BL01598___ykn 396 CGGCTTTGCTGAGGCGATTCGATTTATCCTGCTTGTCACTTTCAGTCTGT 445
BSNT_02392 446 CGGTTATGTTTTACTATTCTGTTCCTCTCACGCTTGTGACAATAGCTGTT 495
|.||.|||||||..||||||||.||.||.||.||.||.||.||.|||..|
BL01598___ykn 446 CTGTCATGTTTTCTTATTCTGTGCCGCTGACTCTGGTTACGATTGCTTCT 495
BSNT_02392 496 CTGCCATTTCTCGCGGTTGCGGTATACCGGTTTGACAAAAGAGTCCATCC 545
|||||.|||.|.|..|..||.||.|||||||||||.||||.|||.|||||
BL01598___ykn 496 CTGCCGTTTTTAGGAGCGGCCGTCTACCGGTTTGATAAAAAAGTGCATCC 545
BSNT_02392 546 CGC-CTTCAGAGGCATCCGCAAATCGTTTGCGAAAC----TCAATACAAA 590
||| .|||.|| .|||..|.|||||.||.|| | |.|||||.||
BL01598___ykn 546 CGCTTTTCGGA-ACATAAGAAAATCATTCGC----CCGTTTAAATACGAA 590
BSNT_02392 591 AGTCCAGGAAAATATCAGCGGCATTAATACGGTTAAATCTCTTTCAAGGG 640
.||.||||||||||||||||||||.||.||.|||||||||.|.||||..|
BL01598___ykn 591 GGTTCAGGAAAATATCAGCGGCATGAACACCGTTAAATCTTTATCAAAAG 640
BSNT_02392 641 AAGATTTTCAGA-TCAGCACTTTCAATAAAGCCAATG--CA-----GAA- 681
||||||||.||| |||..||||| |.|.|..|.|||| || |||
BL01598___ykn 641 AAGATTTTGAGATTCAAAACTTT-ACTCATTCAAATGACCATTTTCGAAC 689
BSNT_02392 682 TACAGGGCGCAGTATTTACAAACATCATCCATCTGGTCTGCGTATTTCCC 731
|| |..|||||.|..|.||.|..|||..|||...||..||.||
BL01598___ykn 690 TA--------AAAATTTAAACGCTTCGTTTATCATGTCGAAGTTCTTTCC 731
BSNT_02392 732 TTTAATGGAGTTCATTGGTAACATTTGTATTGTAGCTCTCCTCTCATACG 781
..|.||||||||.||.||.||.||.||..|.||.|||||.||.||.|.||
BL01598___ykn 732 GCTGATGGAGTTTATCGGCAATATCTGCCTCGTGGCTCTGCTGTCGTTCG 781
BSNT_02392 782 GCGGTTACTTGGTTATGCAAAATCAGC-TCAATCCCGGCGAGCTTGTTGC 830
||||.|...|.||.|||||.|| |||| |.||.||.||.||||||||.||
BL01598___ykn 782 GCGGCTGGCTCGTGATGCAGAA-CAGCTTAAAACCGGGTGAGCTTGTCGC 830
BSNT_02392 831 TTTCTTCAGCCTTGTCAATTATATGATGTGGCCGATTATGAACTTAGGTT 880
|||.|||||.||.||||||||..|||||||||||||.||||||.|.||||
BL01598___ykn 831 TTTTTTCAGTCTCGTCAATTACTTGATGTGGCCGATCATGAACCTCGGTT 880
BSNT_02392 881 TTGTCATCAATATGTTCTCTCAAGCAAAAGCGTCAGGGGAACGCCTGCTC 930
.|||||||||..||||.||.|||||.|||||.||.||.||.||.|||||.
BL01598___ykn 881 ATGTCATCAACCTGTTTTCACAAGCGAAAGCATCGGGAGAGCGGCTGCTG 930
BSNT_02392 931 GACATTCTGGAAAAAGAAGAAGACATTACAGATCATCC--TCATGCTTTG 978
||.|||||.||....||.||.||.||.||.||| .|| .||.||..||
BL01598___ykn 931 GAAATTCTTGATGCCGAGGAGGAAATCACCGAT--ACCGAACAGGCGGTG 978
BSNT_02392 979 TATAAACAAAA-------ATTAACCGGAGATGTC-CATTTCAAAAATGTT 1020
|||| |.|.|.|||.|||||| || ||||...|||||
BL01598___ykn 979 -------AAAAGCGGCAGACTGAACGGCGATGTCGCA-TTCAGCGATGTT 1020
BSNT_02392 1021 TCTCTTGCATACGGAAAAGAACAAACAAACGC----GCTGTGCA----AT 1062
||.|||..|||...|||||| |||.|| ||..|||| .|
BL01598___ykn 1021 TCCCTTCAATATACAAAAGA------AAATGCGGAAGCATTGCATGGGGT 1064
BSNT_02392 1063 GTAAGC-TTTGAGGCAAACAGCGGGAAGGTAATCGGACTGTTGGGCCCGA 1111
|| | |||.||||..|..||||.||...|||.||..|..|.|||.|||
BL01598___ykn 1065 GT---CTTTTCAGGCTGAGCGCGGCAAAACAATTGGGTTAATCGGCGCGA 1111
BSNT_02392 1112 CAGGTTCAGGCAAAAGC----TCAGTGA----CATAG------------- 1140
|.||.||||||||.||| |||.|.| |..||
BL01598___ykn 1112 CGGGGTCAGGCAAGAGCAGCATCATTCAACTGCTGAGCCGCTTTTATGAA 1161
BSNT_02392 1140 -------------------------------------------------- 1140
BL01598___ykn 1162 CCGACATCCGGCCGGATCACGATCGACGGCAAACCGCTTGAACACTACTC 1211
BSNT_02392 1140 -------------------------------------------------- 1140
BL01598___ykn 1212 ATTAAAGATGCTGCGCTCCAATATCGGCGTCGTTCCGCAGGAATCGTTTT 1261
BSNT_02392 1140 -------------------------------------------------- 1140
BL01598___ykn 1262 TATTTTCCTCAACGATCAGGTCAAATATATCGTATGGAAAGCCTGATGCA 1311
BSNT_02392 1140 -------------------------------------------------- 1140
BL01598___ykn 1312 TCGATGGATGAGATTATCGAAAGCGCGAAAAGAGCCCAGGCTCACGATTT 1361
BSNT_02392 1140 -------------------------------------------------- 1140
BL01598___ykn 1362 TATCATGGAGCTTCCGAATCAATATGATACGATGCTCGGCGAGAGGGGGC 1411
BSNT_02392 1140 -------------------------------------------------- 1140
BL01598___ykn 1412 TCGGGCTGTCCGGTGGCCAAAAACAGCGGATTGCGATTGCGAGAGCGATT 1461
BSNT_02392 1140 -------------------------------------------------- 1140
BL01598___ykn 1462 TGTATGAACCCGGGCATTCTCATCCTGGATGATTCGACGAGTGCCGTTGA 1511
BSNT_02392 1140 -------------------------------------------------- 1140
BL01598___ykn 1512 CATGGAAACGGAGCACCGCATTCAACTTGCATTGCGGGAAGTGATGCGGG 1561
BSNT_02392 1140 -------------------------------------------------- 1140
BL01598___ykn 1562 ATCGGACGACTTTCATCATCGCTCACAGAATCTCATCCTTAAAGCATGCC 1611
BSNT_02392 1140 -------------------------------------------------- 1140
BL01598___ykn 1612 GACGAAATCCTTGTTCTCGATAAAGGCGTAGTCAAGGAAAGGGGGACACA 1661
BSNT_02392 1140 -------------------------------------------------- 1140
BL01598___ykn 1662 CGAACAATTAATGGAAGCAAACGGTTTATACAAACGGATTTTTGATTTGC 1711
BSNT_02392 1140 ----------------------------------------------- 1140
BL01598___ykn 1712 AGTATAAAGATCAAAATGTGTTGAATGAGCCGCATTTTGCAGGATAG 1758
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.