Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02404 and BL01607
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:57
# Commandline: needle
# -asequence dna-align/BSNT_02404___sipT.1.5803.seq
# -bsequence dna-align/BL01607___sipT.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02404___sipT-BL01607___sipT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02404___sipT-BL01607___sipT.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02404___sipT
# 2: BL01607___sipT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 597
# Identity: 420/597 (70.4%)
# Similarity: 420/597 (70.4%)
# Gaps: 51/597 ( 8.5%)
# Score: 1456.5
#
#
#=======================================
BSNT_02404___ 1 TTGACCGAGGAAAAAAATACGAATACTGAGAAAACGGCGAAGAAAAAAAC 50
|||||.||.||||||...||.||| ||||||||..|
BL01607___sip 1 TTGACTGAAGAAAAATCCACCAAT---------------AAGAAAAACTC 35
BSNT_02404___ 51 CAATACGT-ACCTGGAATGGGGTAAAGCGATTGTCATCGCTGTTCTGCTG 99
| .|.|.|||||||..|||||.|||.|.||.||.||..|.|||
BL01607___sip 36 -------TCTCTTTGAATGGGTAAAAGCCATTATTATTGCAGTCGTTCTG 78
BSNT_02404___ 100 GCTCTCCTGATC-CGTCACTTTTTGTTTGAACCGTATTTAGTTGAAGGTT 148
||..|..||||| .|.|| |||||.||.||||||||||||||.||||||.
BL01607___sip 79 GCGTTATTGATCAGGGCA-TTTTTATTCGAACCGTATTTAGTGGAAGGTA 127
BSNT_02404___ 149 CATCTATGTATCCCACATTACATGACGGAGAAAGGCTGTTTGTGAATAAA 198
|.||.|||.|.||.||..|.||.||||||||..|||||||.||..|||||
BL01607___sip 128 CGTCGATGGACCCGACGCTGCACGACGGAGAGCGGCTGTTCGTCTATAAA 177
BSNT_02404___ 199 ACAGTCAACTATATCGGCGAGCTGAAGCGCGGAGATATCGTTATTATCAA 248
||.||.|..||..|.|||||..|.|||||.|||||||||||.||||||.|
BL01607___sip 178 ACGGTTAGATACGTAGGCGAATTTAAGCGGGGAGATATCGTCATTATCGA 227
BSNT_02404___ 249 CGGTGAAACTTCTAAAA-----TCCATTATGTAAAAAGATTGATCGGAAA 293
|||.|| |.|||| |||||||||||||..|.||||||||...
BL01607___sip 228 CGGCGA-----CGAAAAGAATGTCCATTATGTAAAGCGCTTGATCGGCCT 272
BSNT_02404___ 294 GCCTGGAGAAACCGTTCAAATGAAGGATGACACGCTTTATATAAACGGTA 343
|||.|||||.|||||.||||||||.|||||||||||.||.||||||||.|
BL01607___sip 273 GCCGGGAGATACCGTGCAAATGAAAGATGACACGCTGTACATAAACGGGA 322
BSNT_02404___ 344 AAAAAGTAGCCGAGCCTTA-CTTGTCTAAAAACAAGAA-------GGAAG 385
|.||.||..|.|||||.|| ||| ||..||||| |||| |||||
BL01607___sip 323 AGAAGGTGTCGGAGCCGTATCTT-TCGGAAAAC-AGAAAAGAGGCGGAAG 370
BSNT_02404___ 386 CAGAAAAACTTGGTGTCAGTCTGACAGGAGACTTTGGACCGGTTAAGGTT 435
||| |.||.||||..|||||.||.||||||||.||.||.||||||
BL01607___sip 371 CAG------TCGGCGTCAAGCTGACGGGCGACTTTGGCCCTGTGAAGGTT 414
BSNT_02404___ 436 CCGAAAGGCAAATACTTTGTCATGGGAGATAACCGGCTGAATTCGATGGA 485
||..|||||||.||.||.||.||||||||.||.||.|.||..||.|||||
BL01607___sip 415 CCCGAAGGCAAGTATTTCGTGATGGGAGACAATCGCCAGAGGTCAATGGA 464
BSNT_02404___ 486 CAGCCGAAACGGGCTGGGACTGATCGCGGAAGATCGAATTGTCGGCACAT 535
||||||.|||||.||.||||||||.|...||.|.|||.|.|.|||.||.|
BL01607___sip 465 CAGCCGGAACGGCCTCGGACTGATTGATAAAAAACGAGTGGCCGGAACTT 514
BSNT_02404___ 536 CGAAGTTTGTCTTTTTCCCGTTTAACGAAATGCGTCAAACAAAATAA 582
||.|.|||||.||||||||||||||||||||.||..|||||.|.|.|
BL01607___sip 515 CGCAATTTGTGTTTTTCCCGTTTAACGAAATCCGAAAAACAGACTGA 561
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