Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02413 and BL01610

See Amino acid alignment / Visit BSNT_02413 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:58
# Commandline: needle
#    -asequence dna-align/BSNT_02413___abh.1.5803.seq
#    -bsequence dna-align/BL01610___abh.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02413___abh-BL01610___abh.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02413___abh-BL01610___abh.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02413___abh
# 2: BL01610___abh
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 288
# Identity:     217/288 (75.3%)
# Similarity:   217/288 (75.3%)
# Gaps:           9/288 ( 3.1%)
# Score: 823.0
# 
#
#=======================================

BSNT_02413___      1 ATGAAATCAATAGGTGTTGTGAGAAAAGTAGATGAATTAGGCCGCATTGT     50
                     .|||||.|||||||.|||||||||||||||||.|||.|.|||.|.||.||
BL01610___abh      1 TTGAAAGCAATAGGAGTTGTGAGAAAAGTAGACGAACTCGGCAGGATCGT     50

BSNT_02413___     51 CATGCCGATTGAGTTGAGACGGGCATTGGATATTGCCATAAAAGACAGCA    100
                     .|||||||||||.||||||.|.||.||||||||..|.||.||.|||||||
BL01610___abh     51 GATGCCGATTGAATTGAGAAGAGCTTTGGATATCTCGATCAAGGACAGCA    100

BSNT_02413___    101 TTGAGTTTTTTGTTGACGGAGATAAAATTATCTTGAAAAAGTACAAACCT    150
                     |.||.||.|||||.|||..|||||||||..||.|||||||.||.|||||.
BL01610___abh    101 TCGAATTCTTTGTCGACCAAGATAAAATCGTCCTGAAAAAATATAAACCG    150

BSNT_02413___    151 CATGGCGTTTGTTTAATGACTGGAGAAATCACTTCAGAAAATAAAGAATA    200
                     ||.||.||.|||.|.|||||.||.|||||||||||.|||||....||.||
BL01610___abh    151 CACGGTGTGTGTCTGATGACCGGTGAAATCACTTCTGAAAACCGCGAGTA    200

BSNT_02413___    201 CGGCAACGGTAAAATTACGCTAAGCCCTGAGGGTGCACAGCTGCTTCTCG    250
                     .||.|||||.|||||||||||.||.|||||.||.||..|..|||||.|.|
BL01610___abh    201 TGGAAACGGGAAAATTACGCTCAGTCCTGAAGGGGCCGAATTGCTTTTGG    250

BSNT_02413___    251 AAGAAATTCAAGCCGCTTTA---------AAAGAATAA    279
                     |||||||..||||.||.|||         ||||.||||
BL01610___abh    251 AAGAAATCAAAGCTGCCTTAAACGGAGTGAAAGCATAA    288


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