Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02414 and BL01611
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:58
# Commandline: needle
# -asequence dna-align/BSNT_02414___kinC.1.5803.seq
# -bsequence dna-align/BL01611___kinC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02414___kinC-BL01611___kinC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02414___kinC-BL01611___kinC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02414___kinC
# 2: BL01611___kinC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1461
# Identity: 878/1461 (60.1%)
# Similarity: 878/1461 (60.1%)
# Gaps: 300/1461 (20.5%)
# Score: 2533.0
#
#
#=======================================
BSNT_02414___ 1 ATGAGAAAATATCAAGCTCGTATCATTTCCATCATTTTGGCAATGATTTT 50
||||.||.||||||||..||.||||||.|.|.|.|..|||||||||.|||
BL01611___kin 1 ATGAAAAGATATCAAGGACGAATCATTGCAACCGTGCTGGCAATGACTTT 50
BSNT_02414___ 51 TATAATGTTTTGGGATTATTTATTTTAT----TTTATAGGCAA-AAACCC 95
|||.|||||||||.|||.||||||.||| |.| |.||.|| |||
BL01611___kin 51 TATCATGTTTTGGAATTTTTTATTCTATGGGGTGT-TGGGAAATAAA--- 96
BSNT_02414___ 96 GATTAATTGGCCTGTTGATATTGTGTATACTGCAG-TCACGCTGG----- 139
||.||||||.|.|||||| ||||.| |.|||||||
BL01611___kin 97 -ATCAATTGGACGGTTGAT----------CTGCTGTTTACGCTGGTGACA 135
BSNT_02414___ 140 ----TAAGTGTCTGGATGCTGGCTTA----TTATATTGATGAGAAACAGC 181
|.||.||.||| |||||.| ||||||.||||||..|.|.|
BL01611___kin 136 TTAATCAGCGTTTGG----TGGCTCACACTTTATATCGATGAGTCAAATC 181
BSNT_02414___ 182 AGCTGGTTAAGAAAATGAAGGATAACGAATGGAAGTATAAACAGCTTTCT 231
||||.||..|.|||.|||||||.|.||||..|||.||||||.|||||||.
BL01611___kin 182 AGCTTGTCTATAAATTGAAGGAAAGCGAAAAGAAATATAAAGAGCTTTCC 231
BSNT_02414___ 232 GAAGAAAAAAACCGCATCATGGATAATTTGCAGGAAATCGTATTTCAAAC 281
..|||||..||||||||.|||||||||.|.|||||||||||.||||||||
BL01611___kin 232 TCAGAAACCAACCGCATAATGGATAATCTTCAGGAAATCGTCTTTCAAAC 281
BSNT_02414___ 282 GAATGCAAAAGGCGAAATTACATATTTAAACCAAGCGTGGGCATCAATAA 331
|.|....|.|||..|.|||||||.|.|.||.||.||||||.||.|..|.|
BL01611___kin 282 GGACCGGATAGGATACATTACATTTCTGAATCAGGCGTGGACAACCCTGA 331
BSNT_02414___ 332 CCGGCTTTTCAAT-CAGT------GAATGTATGGGAACAATGTATAACGA 374
|||| || |||| ||..|..|.|||||.|||||.|||||
BL01611___kin 332 CCGG-------ATACAGTGTCGAAGAGAGCCTTGGAACGATGTACAACGA 374
BSNT_02414___ 375 TTACTT----CATAAAAGAAAAGCACGTAGC-CG-ACCACATTAACACCC 418
|||.|| ||| .|||.|||.|.| || |.|||.|.|.|.|||
BL01611___kin 375 TTATTTTGACCAT------GAAGAACGGATCTCGAATCACCTGATCGCCC 418
BSNT_02414___ 419 AAATCCAAAACAAAGCGTCTTCTGGCATG----------TTTACGGCA-- 456
|..|..|.|||||.|.|.|....||||.| |.||| ||
BL01611___kin 419 AGTTGAAGAACAAGGAGCCCGAAGGCAGGATCGAGGTGCTCTAC--CATC 466
BSNT_02414___ 457 --AAATACGTGACAAAAAACGGCACGATTTTTTGGGGAGAAGTTCATTAT 504
|||.|||.|| |||.| ||.|||||.||||||||.|||
BL01611___kin 467 GCAAAGACGGGA---------GCAAG---TTCTGGGGCGAAGTTCACTAT 504
BSNT_02414___ 505 AAACTTTACTAT--GACCGGGATGACCAATTTACAGGCAGCCTGGGTACA 552
||||||||.||| .|.||| .||||||||.||||||.||||.||.
BL01611___kin 505 AAACTTTATTATAAAAACGG-----TCAATTTACGGGCAGCTTGGGGACG 549
BSNT_02414___ 553 ATGTCAGATATCACTGAGCGGAAAGAGGCTGAAGAT-GAGCTCATTGAGA 601
.||.|.|||.|.||.||.||||||.|.|| |.|||| ||.||..||.||.
BL01611___kin 550 CTGACTGATGTGACAGAACGGAAAAAAGC-GGAGATGGAACTGTTTAAGT 598
BSNT_02414___ 602 TTAATGAACGGCTGGCGAGGGAATCCCAGAAACTATCAATCACAAGTGAA 651
..|||.|.||||||||.|.|.|.||.||.||.||..|.||..|..|..|.
BL01611___kin 599 CGAATCAGCGGCTGGCCATGCAGTCTCAAAAGCTGGCGATGGCCGGGCAG 648
BSNT_02414___ 652 CTTGCCGCAGGTATTGCTCATGAGGTCAGAAACCCTTTAACATCTGTCAG 701
||.||.||.||.||.|||||.||.|||||.|||||..|.||||||||.|.
BL01611___kin 649 CTCGCAGCGGGGATCGCTCACGAAGTCAGGAACCCGCTGACATCTGTAAA 698
BSNT_02414___ 702 TGGTTTCCTCCAGATTATGAAAACACAATATCCGGACAGAAAAGACTATT 751
.||.||..|.|||.|.||||||.|..|||||||.|||.|.|||||.||.|
BL01611___kin 699 CGGATTTTTGCAGCTGATGAAAGCGGAATATCCTGACCGGAAAGATTACT 748
BSNT_02414___ 752 TTGACATCATCTTTTCAGAGATTAAAAGAATCGATTTAGTGCTCAGCGAG 801
|||||||.||.||.||||||||||||.|||||||||..||||||.|.||.
BL01611___kin 749 TTGACATTATTTTCTCAGAGATTAAACGAATCGATTCTGTGCTCGGAGAA 798
BSNT_02414___ 802 CTGC---TGCTTGCAAAACCG---CAGGCAATCACATTTAAAACACACCA 845
|||| ||||.||.|||||| |||| .||| |||||||| |.|.||
BL01611___kin 799 CTGCTTGTGCTGGCCAAACCGCACCAGG--TTCA-ATTTAAAA-AGATCA 844
BSNT_02414___ 846 GCTTAATGA-----GATCTTGAAACAAGTCACGACATTGCTTGATACCAA 890
.|||.| |.|||| .|.|||||..|.||..|.|||||.||.||
BL01611___kin 845 ---AAATCAATTCGGTTCTT-CAGCAAGTGGCAACGCTTCTTGAGACGAA 890
BSNT_02414___ 891 TGCAATTCTGTCCAATATCGTCAT--AGA--GAAAAA---TTTCA----- 928
.||..|.||.|||.| ||| ||| |||||| |||||
BL01611___kin 891 CGCCGTGCTTTCCCA------CATTAAGATCGAAAAAGCGTTTCAGCACG 934
BSNT_02414___ 929 ---AAGAGACAGATGGCTGTATGATTAATGGAGACGAAAATCAGCTGAAG 975
|.||| ||| |.| ||.||.||.||.||||||||..|.||.
BL01611___kin 935 GGGAGGAG-----TGG--GAA--ATAAACGGTGATGAAAATCAAATCAAA 975
BSNT_02414___ 976 CAGGTCTTTATCAACATCATTAAAAACGGAATTGAGGCAATGCCAAAGGG 1025
|||||.||.|||||..|.|||||||||||.||.||.||.|||||..|.||
BL01611___kin 976 CAGGTATTCATCAATTTAATTAAAAACGGGATAGAAGCGATGCCTGACGG 1025
BSNT_02414___ 1026 TGGTGTCGTAACCATTTCAACTGCTAAAACCGCCTCTCATGCA------- 1068
.|||....|.||.|||| ||||..|.|||
BL01611___kin 1026 CGGTAAAATTACGATTT---------------CCTCAAAGGCAGAAGGAG 1060
BSNT_02414___ 1069 -----GTG---ATAAGCGTAAAGGATGAAGGAAACGGCATGCCGCAGGAA 1110
||| ||.|||.|.||.||.|||||....|||||..|.|
BL01611___kin 1061 ACTGTGTGAAAATCAGCATCAAAGACGAAGGCGGGGGCATTTCCC----- 1105
BSNT_02414___ 1111 AAGCTGAAGCAGA-TTGGCAAA----------CCTTTTTATTCAACAAAA 1149
||||.|| |||||||| |||||.|..|||||.|||
BL01611___kin 1106 ------AAGCCGACTTGGCAAAGCTCGGGGAGCCTTTCTTCTCAACGAAA 1149
BSNT_02414___ 1150 GAA-AAGGGCACTGGACTGGGACTTCCCATTTGTTTGAGAATCCTGAA-- 1196
||| ||||| ||.||.||.||.||..|.||||| ||||||
BL01611___kin 1150 GAAGAAGGG-ACAGGTCTTGGGCTGACAATTTG---------CCTGAATA 1189
BSNT_02414___ 1197 -----GG----AACATGACGGGGAATTGAAAATCGA-------------A 1224
|| .||| ||||.|||.|||||||||| .
BL01611___kin 1190 TCATCGGCGCCCACA--ACGGAGAAATGAAAATCGACAGCAAATTGGGCG 1237
BSNT_02414___ 1225 AGTGAAGC----------------------TGGA-AAAG--GCAGCGTC- 1248
||.||||| |.|| |||| ||.|||||
BL01611___kin 1238 AGGGAAGCACATTCCACATTTTGCTTCCGGTCGATAAAGGTGCGGCGTCC 1287
BSNT_02414___ 1249 -------------TT--TCAAGTGGTTTTGC----------CTTTAAAAT 1273
|| .|||| |.|..||| ||.||||||
BL01611___kin 1288 GAAGAGAACGACATTCAGCAAG-GATGCTGCAGCCGCGCAACTATAAAAT 1336
BSNT_02414___ 1274 CAGACAGCTGA 1284
.|
BL01611___kin 1337 AA--------- 1338
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