Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_02416 and BL01612

See Amino acid alignment / Visit BSNT_02416 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:58
# Commandline: needle
#    -asequence dna-align/BSNT_02416___ykqB.1.5803.seq
#    -bsequence dna-align/BL01612___ktrC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02416___ykqB-BL01612___ktrC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02416___ykqB-BL01612___ktrC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02416___ykqB
# 2: BL01612___ktrC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 668
# Identity:     508/668 (76.0%)
# Similarity:   508/668 (76.0%)
# Gaps:           7/668 ( 1.0%)
# Score: 1907.5
# 
#
#=======================================

BSNT_02416___      1 ATGAAAAAAGAATTTGCGGTAATTGGGCTGGGCCGTTTTGGTGGCAGTAT     50
                     |||||||||||||||||.||||||||.||.|||||.||.||.|||||.||
BL01612___ktr      1 ATGAAAAAAGAATTTGCAGTAATTGGACTCGGCCGGTTCGGCGGCAGCAT     50

BSNT_02416___     51 TTGCAAAGCATTAAGCGAAGAAGGCGTCGAGGTTATGGCAATGGATATCG    100
                     ||||||||||||.||.||||||||..|.||.||.|||||.||.||.|..|
BL01612___ktr     51 TTGCAAAGCATTGAGTGAAGAAGGGCTTGAAGTAATGGCGATCGACAGAG    100

BSNT_02416___    101 ATGAAGATAAAGTCAACGAGTATGCCAAGATTGCATCTCACGCAGTTATC    150
                     ||||||||...||.|||||.||.|||||.||||||.|.||.||.||.||.
BL01612___ktr    101 ATGAAGATCGCGTAAACGAATACGCCAAAATTGCAACACATGCTGTGATA    150

BSNT_02416___    151 GGTGATTCGACAGACGAATCTGTCCTGAAAAATTTAGGCCTGCGAAATTT    200
                     ||.||..|.||||||||||||||.||||||||..|.||.|||||.|||||
BL01612___ktr    151 GGAGACACTACAGACGAATCTGTGCTGAAAAACCTTGGACTGCGCAATTT    200

BSNT_02416___    201 TGACCACGTTATTGTAGCAATCGGGGAAAATATTCAAGCGAGTATTTTAA    250
                     ||||||.||.||||||||.||||||||.||.|||||||||||.|||||.|
BL01612___ktr    201 TGACCATGTCATTGTAGCGATCGGGGAGAACATTCAAGCGAGCATTTTGA    250

BSNT_02416___    251 CGACACTCATTCTGAAAGAACTTGGCGTCCATACGATTACAGTTAAAGCG    300
                     |.||.||.||..|.|||||.|||||.||..|.|.||||||.||.|||||.
BL01612___ktr    251 CAACGCTGATCTTAAAAGAGCTTGGTGTGAAAATGATTACCGTAAAAGCT    300

BSNT_02416___    301 CAGAACGATTATCACGAAAAAGTGCTGTCTAAAATTGGTGCGGATCACAT    350
                     ||.|||||||||||.||||||||..|.||.|||||.||.|||||.|..||
BL01612___ktr    301 CAAAACGATTATCATGAAAAAGTATTATCCAAAATCGGAGCGGACCGGAT    350

BSNT_02416___    351 CGTCCACCCGGAACGCGATATGGCAAAACGAATTGCGCATAATATCGTGT    400
                     |||.||||||||.||.||.||||.||||.|.||.||.||.||.|||||.|
BL01612___ktr    351 CGTTCACCCGGAGCGTGAAATGGGAAAAAGGATCGCCCACAACATCGTCT    400

BSNT_02416___    401 CCAACAATGTACTTGACTATTTGGAGCTGTCTGAAGAGCATAGTCTTGTT    450
                     ||||||||||.|||||.|||.||||.||.|||||.||.||.||.|||||.
BL01612___ktr    401 CCAACAATGTGCTTGATTATCTGGAACTTTCTGATGAACACAGCCTTGTC    450

BSNT_02416___    451 GAAATCGTAGCTAACAGCCGCCTGGCTGGAAATACGCTTCTCGATTTAGA    500
                     |||||||.|||.|||.||...|||||.||||||||.||.||.||..|.||
BL01612___ktr    451 GAAATCGCAGCGAACGGCAAACTGGCCGGAAATACACTGCTTGACCTTGA    500

BSNT_02416___    501 TATTCGCGCAAAATACGGTATTAACATCGTAGCCATAAAAAGGGGCAAGG    550
                     |||.||.||.|.||||||.|||||.||.||.||.||.||..||||.||||
BL01612___ktr    501 TATCCGGGCCAGATACGGAATTAATATTGTTGCGATCAAGCGGGGAAAGG    550

BSNT_02416___    551 AAGTCATCGTATCACCGCTTGCAACCGAAGTCATCCACCAAGAAGATATA    600
                     |||||||||||||.||||||||.||.||||..||.||..||||.|||||.
BL01612___ktr    551 AAGTCATCGTATCTCCGCTTGCCACTGAAGAAATTCAGAAAGACGATATT    600

BSNT_02416___    601 CTCATTGTTATTGGATCAGTTACAGACATCTCCCGTTTCGAAAAAAGAGT    650
                     .|.||.||.||.||.|||..|.|.|||||.....|.||.|||||||.|||
BL01612___ktr    601 TTAATCGTCATCGGCTCAAATCCTGACATTGAGAGATTTGAAAAAAAAGT    650

BSNT_02416___    651 TCTTCATACA--AAATAG    666
                     ..|||| |||  ||    
BL01612___ktr    651 CTTTCA-ACATTAA----    663


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.