Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02434 and BL01633

See Amino acid alignment / Visit BSNT_02434 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:59
# Commandline: needle
#    -asequence dna-align/BSNT_02434___slp.1.5803.seq
#    -bsequence dna-align/BL01633___slp.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02434___slp-BL01633___slp.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02434___slp-BL01633___slp.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02434___slp
# 2: BL01633___slp
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 428
# Identity:     244/428 (57.0%)
# Similarity:   244/428 (57.0%)
# Gaps:         103/428 (24.1%)
# Score: 588.0
# 
#
#=======================================

BSNT_02434___      1 ATGCGATATCGCGCGGTATTCCCCATGCTGATAATAGTATTTGCTTTAT-     49
                     |||.|.|.|||.|||.|||||.||  ||.|..|.|  |.|||.||||.| 
BL01633___slp      1 ATGTGGTTTCGAGCGATATTCACC--GCCGCAATT--TGTTTCCTTTTTT     46

BSNT_02434___     50 ---CG---GGCTGTACGCTTTC-CACCATCAATCCGATGAAAAAAAGCCG     92
                        ||   ||.|||.|..|.|| || |||||..||  ||   |..|||.|
BL01633___slp     47 TGACGAGTGGATGTTCTTTATCTCA-CATCATGCC--TG---ACCAGCAG     90

BSNT_02434___     93 GATTGA--CAACATTCA--------TCATACACAAATCCTGTTTTTTTCT    132
                     .||..|  ||.||.|||        |||     |..||.|.||||||||.
BL01633___slp     91 CATCAAAGCACCAATCACCGCCACCTCA-----AGCTCATCTTTTTTTCC    135

BSNT_02434___    133 GATGAGAACCAAATAGACCAGGAAGCGCCTTATTACGATGCACTGCTTGA    182
                     |||||..|.||.||.||.|||||||.|.|||||||.|||||.||..|.||
BL01633___slp    136 GATGACGAGCATATGGAGCAGGAAGTGGCTTATTATGATGCGCTTTTGGA    185

BSNT_02434___    183 TTTAGAAAAAGATTATCCCGA-------GCAAATAGATAAAATGAAGGTC    225
                     ||||.|||||||.|.||||||       .|||.||...|||.|     ||
BL01633___slp    186 TTTAAAAAAAGAATTTCCCGAACAGGTTTCAAGTATGGAAATT-----TC    230

BSNT_02434___    226 -TATGATAAAAAAGAAGGC---TGGGAAGATGAGATTGAAACTGTC---C    268
                      .||||||      |||||   |||.||.|.|||.||.||   |||   |
BL01633___slp    231 ACATGATA------AAGGCGAGTGGAAAAAAGAGGTTAAA---GTCTTTC    271

BSNT_02434___    269 CTACCCTTATGGTTGT---TGATCAGCGCCATGTCGTGGTGAAAATCGAG    315
                     |.|.|.|..||.||||   ||||.||   .|.||..||||.|||||.||.
BL01633___slp    272 CAAGCTTGCTGCTTGTTAATGATAAG---AAAGTACTGGTTAAAATTGAA    318

BSNT_02434___    316 GGATGTGTGAAAAAGAAAG---AAGACATCATTAAACCAT--TACAGCAT    360
                     |||      ||||..||||   ||||      ||||  ||  ||..||.|
BL01633___slp    319 GGA------AAAATAAAAGATAAAGA------TAAA--ATTGTAAGGCTT    354

BSNT_02434___    361 GTGCTGTCAAAA-------------TAA    375
                     .|    ||||||             |||
BL01633___slp    355 CT----TCAAAAGGAATTGAAACATTAA    378


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