Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00432 and BL01640

See Amino acid alignment / Visit BSNT_00432 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:04
# Commandline: needle
#    -asequence dna-align/BSNT_00432.1.5803.seq
#    -bsequence dna-align/BL01640___glnK.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00432-BL01640___glnK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00432-BL01640___glnK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00432
# 2: BL01640___glnK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1437
# Identity:     941/1437 (65.5%)
# Similarity:   941/1437 (65.5%)
# Gaps:         195/1437 (13.6%)
# Score: 2864.5
# 
#
#=======================================

BSNT_00432         1 ATGTTCTGGGTCAAAAGCAATTTGCAGGTTTTCTCCCGATTCCCCAAAAT     50
                          .|||||               ||                      
BL01640___gln      1 -----ATGGGT---------------GG----------------------      8

BSNT_00432        51 AAAAAGCGAGGA--TGTGATCAACATAAAACTGGAACGGTTTATTGAAAA     98
                       |||.||.|||  .|||||   .|.||||..||..|||.||.||.||||
BL01640___gln      9 --AAATCGGGGAAGCGTGAT---GACAAAAGCGGCCCGGCTTGTTAAAAA     53

BSNT_00432        99 AGACGGATATA---TATTGGCCCTGATGCTGATTACGGTGCCGCTGGCCG    145
                     ||||||.||||   ||.|||   |||||.||.|.||.|||||||||||.|
BL01640___gln     54 AGACGGCTATATCTTAATGG---TGATGATGTTAACTGTGCCGCTGGCAG    100

BSNT_00432       146 GTGAACTGAAATTTTATCCCCTCAATGAAGA-ATTCCGGGTCAGCTTTGG    194
                     |.||.|||||.||||||||.||.||.| ||| .|||.||||||||||.||
BL01640___gln    101 GAGAGCTGAAGTTTTATCCGCTGAACG-AGACCTTCAGGGTCAGCTTCGG    149

BSNT_00432       195 GGCACCGGTTTTTTTC-TTCTTTTTAT-CATTGTTGCGGCATGTGCCCGC    242
                     ||..|||..|||.||| |||||||..| |  ||.|||||.|||||||.||
BL01640___gln    150 GGTTCCGACTTTCTTCTTTCTTTTGCTGC--TGCTGCGGAATGTGCCGGC    197

BSNT_00432       243 TGTGCTG-CCGGGTTTTCTGACTGGAGCGGCTGTTTTCATCTTTCGCGT-    290
                     ||||||| ||||.|||| |.||.||.|||||.||..||...|||||.|| 
BL01640___gln    198 TGTGCTGTCCGGCTTTT-TAACGGGGGCGGCAGTCGTCGGATTTCGTGTG    246

BSNT_00432       291 ---CTTTCTGGAATTATGGGGCGGAGGACACA-ATGGACTGACTCCGATT    336
                        |||..||||.||   ||||.|.||   || ||.||.||.||...||.
BL01640___gln    247 CTGCTTGATGGATTT---GGGCCGGGG---CAGATCGATTGGCTGTCATC    290

BSNT_00432       337 CTGT-------ATGATCAAGCGTCTGGCTTTTTCTTTTATATGACTTACG    379
                     ||.|       ||.|||   ||.||   ||||||||||||.|.||.||.|
BL01640___gln    291 CTTTTACTACCATTATC---CGACT---TTTTTCTTTTATTTCACATATG    334

BSNT_00432       380 CCTGTCTGTTTTCCATATTAAAGGCCAATCG-TTTCCGTGAA---CGGCC    425
                     |.|.|||.||.|.|.|...|||.|..||.|| ||||    ||   ||.||
BL01640___gln    335 CGTTTCTATTCTACTTGGCAAAAGTGAAACGATTTC----AATTTCGCCC    380

BSNT_00432       426 GATTATGCTCGGTTTCATTGGGTTTAT---------GATTGAAGTTGTGT    466
                           ||||   |.|||.||||||.|         .||.|||.|..|..
BL01640___gln    381 ------GCTC---TACATCGGGTTTCTCGGCTTCGGAATCGAACTGATTG    421

BSNT_00432       467 CAGATTGTGTCGAGCTGGCTGTGCAATTTCTCATTTT----TCATACGGT    512
                     |.|||.|.|.|||.|||||.||.||||.|.|.||.||    || |||   
BL01640___gln    422 CCGATGGAGCCGAACTGGCCGTTCAATATATGATGTTCGAGTC-TAC---    467

BSNT_00432       513 TGTCACGCCTGAGAAAATCACTGACATTGCGGTGATTGCGATTTCTCACA    562
                     .|||||.||.|..||||||...|||||...||.||||||..||||.||||
BL01640___gln    468 CGTCACCCCGGGAAAAATCCGCGACATGATGGCGATTGCTTTTTCCCACA    517

BSNT_00432       563 CATTTATTGTGATGAGCTTTTATAGTGTGCTGAAGCTGTATGAAACACAA    612
                     ..|||||||||.|||||||||.||.|||..||||||||||||||||.|||
BL01640___gln    518 GCTTTATTGTGCTGAGCTTTTTTAATGTCATGAAGCTGTATGAAACGCAA    567

BSNT_00432       613 TCGAGAGAAAAACAGACAAGGCAGCAGCACGAGCACATGCTGATGATCGT    662
                     |||.|.|||||.||||...|..|.||..|.||||||||||||||||||||
BL01640___gln    568 TCGCGGGAAAAGCAGATCCGCGAACAAAATGAGCACATGCTGATGATCGT    617

BSNT_00432       663 TTCCAATTTATATGAAGAAACGGTGCACCTAAAAAAGACATTGAAAACGA    712
                     |||.||.||||||||||||||.||.||..|.||||||||.|||||.|..|
BL01640___gln    618 TTCAAACTTATATGAAGAAACCGTTCATTTGAAAAAGACGTTGAAGAATA    667

BSNT_00432       713 C---AGAGAAAGTGACAAACGATTCGTATCAGTTCTATCGGG-----AAA    754
                     |   |||||   |.||||||||.||.||||||.|.|| |.||     |||
BL01640___gln    668 CTGAAGAGA---TTACAAACGAGTCCTATCAGCTGTA-CAGGCTCTTAAA    713

BSNT_00432       755 T-GA-AGGGC---AAGGAT------GTTCAGCTGAGC-GGCAGAA--TCC    790
                     | || ||.||   ||..||      ||.|.||.||.| |.|||||  |.|
BL01640___gln    714 TAGACAGAGCGATAACAATTCCTCCGTCCGGCAGATCAGCCAGAAAGTGC    763

BSNT_00432       791 TGAGACTGGCCGGAGAGATTCATGAAGTGAAAAAGGACAACCAGCGGATA    840
                     ||.|.||.|||||.||.||.|||||.||.|||||.|||||.|||||.||.
BL01640___gln    764 TGCGCCTCGCCGGTGAAATCCATGAGGTCAAAAAAGACAATCAGCGCATT    813

BSNT_00432       841 TTCGCAGGGCTTTCAAAACTGATTTCGAATGAGAGTTTGAGAGATTATAT    890
                     |||||.||.|||||||||.|.|||||.||.||.||.||.|||||.||.||
BL01640___gln    814 TTCGCCGGACTTTCAAAATTAATTTCCAAAGAAAGCTTCAGAGACTACAT    863

BSNT_00432       891 GAGGGCTTC---TGATTTGCTGCAGCTCGTGATTCGAATGAATGAAAAGT    937
                        ||||.|   .|||.||.|.|.|||.||||...|.||.|||..|||||
BL01640___gln    864 ---GGCTGCAGAGGATCTGGTCCGGCTTGTGACCGGCATAAATCGAAAGT    910

BSNT_00432       938 ACGCTGAAGCACTAGGGAAGCAGATTGATTTTTACTGCTCGATCGAGGGA    987
                     |.||||||.|.||.|..||..|.|||||.|||.|.|..|||||.||.|||
BL01640___gln    911 ATGCTGAATCGCTCGAAAAAGACATTGACTTTCATTATTCGATAGACGGA    960

BSNT_00432       988 GAGCAT--GACGAATATCACGTATTTATCGTGCTTTCGATCATTAATAAT   1035
                     ||.|||  ||  ||||.||.||.|.||.|||..|.||..|.|||||||||
BL01640___gln    961 GAACATCCGA--AATACCATGTGTATACCGTATTATCCGTAATTAATAAT   1008

BSNT_00432      1036 CTAACAGCAAATGCGGTAGAGGCTATGGATGAAGAGGGAATGG-----TC   1080
                     .|.|..||.||.|||||.||.||.||   |.||.|  |.|.||     ||
BL01640___gln   1009 ATTATGGCGAACGCGGTGGAAGCGAT---TCAAAA--GCAGGGCTCCATC   1053

BSNT_00432      1081 AGCCTGAGGCTCCGTAAGC----CAAATGAGAGTATGGTAGAATTCCAGG   1126
                     ||.||.||.|||..||.||    | .||||   .|||.|.||||.||..|
BL01640___gln   1054 AGACTCAGCCTCTATAGGCGCGGC-GATGA---CATGCTGGAATGCCGCG   1099

BSNT_00432      1127 TGGAAGACAATGGCCCCGGGATTTCCGAGAAAATCGGAGACATTGTGTTT   1176
                     |||||||..|.||.||.||.|||.||||||||.|||||||..|.||||||
BL01640___gln   1100 TGGAAGATGACGGACCGGGCATTCCCGAGAAAGTCGGAGATGTGGTGTTT   1149

BSNT_00432      1177 GACCCGGGCTTTACTTCAAAATATGACGAATTTGGCACGCCTTCTACGGG   1226
                     ||.|||||.|..||.|||||||||||.|||||.||.||.|||||.||.||
BL01640___gln   1150 GAGCCGGGATACACGTCAAAATATGATGAATTCGGAACTCCTTCAACCGG   1199

BSNT_00432      1227 TATCGGACTTTCCTACGTAAAGGAAA---TCGTGACTGAGCTAGAAGGGG   1273
                     .|||||.||.||.||.||.|||||||   |||.|   |||||.|.|||| 
BL01640___gln   1200 AATCGGTCTGTCTTATGTGAAGGAAACTGTCGAG---GAGCTTGGAGGG-   1245

BSNT_00432      1274 ATATCACGTTTGAT-----AATCA-GC-AGCGGGGAGTGGTGTTTGCCAT   1316
                       |.||  ||.|||     |||.| || |||  ||.||.||||||.|.||
BL01640___gln   1246 --AGCA--TTCGATTCCGGAATGATGCAAGC--GGTGTTGTGTTTACGAT   1289

BSNT_00432      1317 CAGGCTGCCTGTCCGGCATTTGATTCAGAAAGGGTGA   1353
                     |||.||.||.||.|..||.||||||||||||||||||
BL01640___gln   1290 CAGACTTCCGGTTCAACAATTGATTCAGAAAGGGTGA   1326


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