Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00466 and BL01643
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:06
# Commandline: needle
# -asequence dna-align/BSNT_00466___phoD.1.5803.seq
# -bsequence dna-align/BL01643___phoD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00466___phoD-BL01643___phoD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00466___phoD-BL01643___phoD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00466___phoD
# 2: BL01643___phoD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1770
# Identity: 1303/1770 (73.6%)
# Similarity: 1303/1770 (73.6%)
# Gaps: 36/1770 ( 2.0%)
# Score: 4526.0
#
#
#=======================================
BSNT_00466___ 1 ATGGCATACGACAGTCGTTTTGATGAATGGGTACAGAAACTGAAAGAGGA 50
|||.||.|.||..|.|...|.||.||||||.|..|.|||||||..|||||
BL01643___pho 1 ATGACACATGAAGGACCGCTGGAGGAATGGATGAAAAAACTGAGCGAGGA 50
BSNT_00466___ 51 AAGCTTTCAA-AACAATACGTTTGACCGCCGCAAATTTATTCAAGGAGCG 99
|||| .|||| .||||||||||||||||||||...|||||||||||.||.
BL01643___pho 51 AAGC-CTCAAGGACAATACGTTTGACCGCCGCCGCTTTATTCAAGGGGCC 99
BSNT_00466___ 100 GGGAAGATTGCAGGACTTTCTCTTGGATTAACGATTGCCCAGTCGGTTGG 149
||.||.||.||.||.|||||.||.|||.|..||||.||.||.|||.|.||
BL01643___pho 100 GGCAAAATAGCCGGGCTTTCGCTCGGACTTGCGATCGCGCAATCGATGGG 149
BSNT_00466___ 150 GGCCTTTGAAGTAAATGCTGCGCCTAAATTCTC--AAGCTATCCGTTTAC 197
|||..|.|||||.|||||.||.||.|..||||| || |||||||||||
BL01643___pho 150 GGCAATGGAAGTCAATGCAGCACCGAGGTTCTCCGAA--TATCCGTTTAC 197
BSNT_00466___ 198 ATTAGGGGTAGCGTCAGGTGATCCGCTTTCTGACAGTGTCGTGCTTTGGA 247
|.|.||.||.||.||.||.|||||||||||||||||.|||||..|.||||
BL01643___pho 198 ACTTGGCGTTGCATCGGGAGATCCGCTTTCTGACAGCGTCGTATTGTGGA 247
BSNT_00466___ 248 CACGTCTGGCACCAGATCCGCTGAATGGCGGGGGAATGCCGAAGCAAGCA 297
||.|.|||||.||.||||||||.||.||.||.||.|||||.||..||||.
BL01643___pho 248 CAAGGCTGGCGCCCGATCCGCTAAACGGGGGCGGGATGCCAAATGAAGCT 297
BSNT_00466___ 298 GTGCCTGTCAAATGGGAGGTCGCAAAGGATGAGCATTTCCGCAAAATCGT 347
||..|.||.|||||||||.|||||.|.||.||.|..||||||....||||
BL01643___pho 298 GTATCCGTGAAATGGGAGCTCGCAGAAGACGAACGCTTCCGCCGTGTCGT 347
BSNT_00466___ 348 AAGAAAAGGCACTGAAATGGCTAAACCAAGTCTTGCCCATTCCGTTCATG 397
.|.|...||.||.||||..||.|.|||....|||||.|||||.||.||||
BL01643___pho 348 CAAACGGGGAACCGAAAAAGCAACACCTCACCTTGCACATTCGGTACATG 397
BSNT_00466___ 398 TGGAAGCGGACGGGCTTGAGCCAAACAAAGTGTACTATTACCGTTTCAAA 447
..||.|....||||||..|.||.||..|.||.|||||||||||.||.|||
BL01643___pho 398 CCGAGGTATCCGGGCTGAAACCGAATCATGTATACTATTACCGCTTTAAA 447
BSNT_00466___ 448 ACCGGTCATGAACTAAGCCCTGTCGGAAAAACAAAAACACTGCCTGCCCC 497
..|||..|..|.||.||.||||||||.||.|||||.||.||.||.||.||
BL01643___pho 448 TGCGGCAACCAGCTGAGTCCTGTCGGCAAGACAAAGACGCTTCCGGCGCC 497
BSNT_00466___ 498 TGGCGCCAATGTGCCGCAAATGACCTTTGCATTTGCTTCCTGCCAGCAAT 547
.||.||..||||..|..||.|.||.||.||.||||||||.||||||||.|
BL01643___pho 498 CGGGGCAGATGTTGCTAAATTCACATTCGCTTTTGCTTCATGCCAGCAGT 547
BSNT_00466___ 548 ATGAGCACGGATATTATACGGCCTACAAGCATATGGCAAAGGAAAAGCTT 597
|.||.|||||.||||||||.|||||..||||||||||||||||||||||.
BL01643___pho 548 ACGAACACGGCTATTATACCGCCTATCAGCATATGGCAAAGGAAAAGCTC 597
BSNT_00466___ 598 GATCTTGTCTTCCATCTCGGTGATTACATATATGAATACGGCCCAAATGA 647
||||||||.||.||||||||.||.||.||.|||||.|||||.||.|||||
BL01643___pho 598 GATCTTGTTTTTCATCTCGGCGACTATATTTATGAGTACGGTCCGAATGA 647
BSNT_00466___ 648 ATATGTATCAAAAACAGGCAATGTCCGCACGCACAACAGCGCGGAAATCA 697
||||||.||.||||||||.||||||.|.||.||||.|.|..|.|||||||
BL01643___pho 648 ATATGTTTCGAAAACAGGAAATGTCAGAACACACAGCGGTCCTGAAATCA 697
BSNT_00466___ 698 TTACGCTGCAAGACTATCGGAACCGTCACGCTCAATACCGTTCTGACGCC 747
|..|.||||..||.||.||.||||||||.||.|||||||||||.||.||.
BL01643___pho 698 TGTCACTGCTCGATTACCGAAACCGTCATGCCCAATACCGTTCAGATGCA 747
BSNT_00466___ 748 AATCTTAAAGCTGCACATGCGGCATTCCCTTGGGTTGTAACTTGGGATGA 797
||.||.||||||||.|||||.||.|||||.||||||||.||.|||||.||
BL01643___pho 748 AACCTGAAAGCTGCGCATGCCGCCTTCCCGTGGGTTGTCACATGGGACGA 797
BSNT_00466___ 798 CCATGAAGTTGAAAACAACTATGCCAATAAAATACCTGAAAAAGGACAGT 847
|||||||||.||.|||||||||||.|||...||.||.||||||||.||||
BL01643___pho 798 CCATGAAGTGGAGAACAACTATGCGAATGTCATCCCGGAAAAAGGCCAGT 847
BSNT_00466___ 848 CGGTTGAAGCATTCGTGCTCCGTCGCGCGGCAGCATACCAGGCATACTAT 897
|.||||||||.||..|....||.|||||.||.||||||||.||.||.||.
BL01643___pho 848 CAGTTGAAGCGTTTATTAAACGGCGCGCCGCCGCATACCAAGCTTATTAC 897
BSNT_00466___ 898 GAACATATGCCGCTCCGCATTTCC--TCTTTGCCGAATGGCCCAGATATG 945
||.||||||||||||||| ..|| ||.||||||||.||.||.||||||
BL01643___pho 898 GAGCATATGCCGCTCCGC--CGCCAATCCTTGCCGAACGGTCCTGATATG 945
BSNT_00466___ 946 CAGCTGTACCGGCACTTTACGTACGGAAACCTGGC-GTCCTTCAATGTGC 994
||..||||||||.|.|||.|.|||||.||..|.|| |.|.|| |..||||
BL01643___pho 946 CAATTGTACCGGAATTTTTCCTACGGCAATTTAGCTGACATT-AGCGTGC 994
BSNT_00466___ 995 TTGATACCCGCCAGTACAGGGACGACCAAGCCAATAACGACGGCAATAAG 1044
|.||||||||.|||||..|.||.|||||.||.||...|||.|||||||||
BL01643___pho 995 TGGATACCCGTCAGTATCGCGATGACCAGGCTAACGGCGATGGCAATAAG 1044
BSNT_00466___ 1045 CCGCCTTCTGATGAATCGCTCAATCCGAATCGGACCCTGCTTGGAAAAGA 1094
||||||||||||||||||....|||||||.|||||.|||||||||...||
BL01643___pho 1045 CCGCCTTCTGATGAATCGAATGATCCGAAGCGGACGCTGCTTGGAGCGGA 1094
BSNT_00466___ 1095 ACAGGAGCAGTGGCTCTTCAACAATTTGGGCAGCT-CGACTGCCCACTGG 1143
.||||||...|||||.||..|||||.||.|..||| ||| .||.||||||
BL01643___pho 1095 GCAGGAGGCTTGGCTGTTTGACAATCTGAGTCGCTCCGA-GGCGCACTGG 1143
BSNT_00466___ 1144 AATGTGCTGGCGCAGCAGATTTTCTTTGCCAAGTGGAATTTCGGGACAAG 1193
||..|..|.||.|||||||||||||||||..|||||||.||.||||||||
BL01643___pho 1144 AACATTATCGCACAGCAGATTTTCTTTGCGCAGTGGAACTTTGGGACAAG 1193
BSNT_00466___ 1194 CGCAAGC-CCGATCTACAGCATGGATTCGTGGGACGGCTACCCGGCTCAG 1242
||| .|| |||||.|||||||||||||||||||||||.||.||.||||||
BL01643___pho 1194 CGC-GGCGCCGATTTACAGCATGGATTCGTGGGACGGATATCCCGCTCAG 1242
BSNT_00466___ 1243 CGCGAACGGGTGATCAATTTCATTAAA-AGCAAAAATCTGAATAATGTTG 1291
|||.|.|||||||||.|.|||||.||| ..|||||| |||||.||..|.|
BL01643___pho 1243 CGCAAGCGGGTGATCGACTTCATCAAATCTCAAAAA-CTGAACAACATCG 1291
BSNT_00466___ 1292 TCGTACTGACAGGTGATGTACACGCAAGCTGGGCATCGAATTTGCATGTC 1341
||||.||.||.||||||||.||.||.|||||||||...|||.|||..||.
BL01643___pho 1292 TCGTCCTTACCGGTGATGTGCATGCCAGCTGGGCAAATAATCTGCTCGTT 1341
BSNT_00466___ 1342 GATTTCGAGAAGACAAGTTCAAAAATATTCGGAGCCGAATTTGTCGGAAC 1391
|||||.||.||..|.|..||..|.||.||.||.|..||.||.|||||.||
BL01643___pho 1342 GATTTTGACAATCCGAAATCGGACATCTTTGGCGTGGAGTTCGTCGGGAC 1391
BSNT_00466___ 1392 CTCGATCACATCCGGAGGAAACGGCGCCGATAAGCGGGCGGATACGGACC 1441
.|||||.|||||.||||||||||||||.|||||..|.|||||||||||..
BL01643___pho 1392 GTCGATTACATCGGGAGGAAACGGCGCTGATAAAAGAGCGGATACGGATA 1441
BSNT_00466___ 1442 AAATTTTAAAAGAA-AATCCGCACATCAAGTTCTTTAACGACTATCGCGG 1490
|.||||| |..||| |||||.||.||.|||||.||.||.||.||.|||||
BL01643___pho 1442 AGATTTT-ATCGAACAATCCTCATATAAAGTTTTTCAATGATTACCGCGG 1490
BSNT_00466___ 1491 ATATGTCCGCTGTACAGTGACGCCTCACCAGTGGAAAGCCGATTATCGGG 1540
.|||||.||||||||.||.||.||..|..|.|||....|.|||||.||.|
BL01643___pho 1491 CTATGTGCGCTGTACGGTCACCCCGGAAGAATGGCGGACAGATTACCGCG 1540
BSNT_00466___ 1541 TGATGCCGTTTGTGACCGAGCCGGGCGCAGCCATTTCCACGCGGGCTTCA 1590
|..|.||||.||||||.||||||||.||.||..||||.||..|.|||||.
BL01643___pho 1541 TCGTCCCGTATGTGACAGAGCCGGGTGCGGCGGTTTCGACAAGAGCTTCC 1590
BSNT_00466___ 1591 TTCGTTTACCAGAAAGACCAAACTGGGTTGAGAAAGGTA--TCATCCACA 1638
|..|||||.||.||||||.|.||.|||.| ||||.|.| .|.|| ||
BL01643___pho 1591 TATGTTTATCATAAAGACTACACAGGGCT--GAAACGGACCGCTTC--CA 1636
BSNT_00466___ 1639 ACAAT---CCAAGGCGGGGTGAAGCAATCCGATGAGGTCGAAGAGGATCG 1685
|||.| || .||.||.||||||.|.||..|.||.||.|||||.||.||
BL01643___pho 1637 ACATTGTGCC-TGGAGGCGTGAAGAAGTCAAACGAAGTAGAAGAAGACCG 1685
BSNT_00466___ 1686 TTTCTTTGCGCACA-ACAA-AGCCCACGAAAAACAAATGATTAAGAAGCG 1733
||||.| |||||| |||| .|||||..|.||.|||.|||...|.||| |
BL01643___pho 1686 TTTCCT--CGCACATACAAGGGCCCATCAGAAGCAAGTGAAGCAAAAG-G 1732
BSNT_00466___ 1734 GGCAAAAA-TCACGAATTAA 1752
.|.||||| |.||..|.|||
BL01643___pho 1733 AGAAAAAAGTAACCCAGTAA 1752
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