Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00512 and BL01694

See Amino acid alignment / Visit BSNT_00512 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:08
# Commandline: needle
#    -asequence dna-align/BSNT_00512___yceC.1.5803.seq
#    -bsequence dna-align/BL01694___yceC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00512___yceC-BL01694___yceC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00512___yceC-BL01694___yceC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00512___yceC
# 2: BL01694___yceC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 619
# Identity:     447/619 (72.2%)
# Similarity:   447/619 (72.2%)
# Gaps:          35/619 ( 5.7%)
# Score: 1527.0
# 
#
#=======================================

BSNT_00512___      1 GTGGCAATTTCTTTAGAAAAAGGTCAACGAATTGATTTAACAAAAGGAAA     50
                     .||||.|||||||||||.||||||||.||.||||||||||||||||||||
BL01694___yce      1 TTGGCTATTTCTTTAGAGAAAGGTCAGCGGATTGATTTAACAAAAGGAAA     50

BSNT_00512___     51 AGCCGGTCTGTC-AAAATTGATGGTCGGTCTCGGCTGGGACCC---AGTG     96
                     |||.||.||.|| ||.||| .|.|||||||||||||||||.||   ||.|
BL01694___yce     51 AGCGGGGCTTTCGAAGATT-TTAGTCGGTCTCGGCTGGGATCCGGTAGCG     99

BSNT_00512___     97 TCCTCAGGCGGAGGATTCTTCAGCAAACTGCTTGGCGGAGGCGGTCCGAA    146
                     |||..|.||||.||.||.||..|.||.|||.||||.|||||....|||||
BL01694___yce    100 TCCGGAAGCGGCGGTTTTTTTGGAAAGCTGTTTGGGGGAGGAACCCCGAA    149

BSNT_00512___    147 TATCGACTGTGATGCTTCAGTGCTGATGCTGGAAAACGGAAAATTCACCG    196
                     |||.||.|||||.||.||.||||||||||||||||||||||.|.||||.|
BL01694___yce    150 TATTGATTGTGACGCATCCGTGCTGATGCTGGAAAACGGAAGAGTCACAG    199

BSNT_00512___    197 AAAAGAAAAATCTGATTTATTTCGGCAACCTGAAAAGCCGCTGCGGCGGT    246
                     |.||.||.||..|.|||||||||||.|||.|||..|||.|.||||||.|.
BL01694___yce    200 AGAACAAGAACGTCATTTATTTCGGAAACTTGAGGAGCAGATGCGGCAGC    249

BSNT_00512___    247 GTACAGCATACAGGCGACAACCTGACGGGTGACGG-TGCGGGCGATGACG    295
                     .|..|.|||||.||.||.||.|||||.||.||.|| .|| ||.|||||.|
BL01694___yce    250 ATCGAACATACCGGAGATAATCTGACAGGCGAAGGCAGC-GGAGATGATG    298

BSNT_00512___    296 AGCAAATTATGATAGATTTAGATAAAGTGCCTGGAAACATCG-------A    338
                     |.|||||.||..|||||||..|.|||||.|||       |||       |
BL01694___yce    299 AACAAATCATTGTAGATTTGCAAAAAGTTCCT-------TCGCATATTCA    341

BSNT_00512___    339 TAAGCTTGTATTTGTAGTGAACATTTACGATTGTGTCAGAAGAAAACAAG    388
                     |||||||||.|||||.|||||.||.||||||||.||.|.|.|||..||..
BL01694___yce    342 TAAGCTTGTCTTTGTCGTGAATATATACGATTGCGTGAAACGAAGCCAGC    391

BSNT_00512___    389 ATTTCGGCATGATTCAAAATGCGTTTATCCGCGTAGTTGATCAATCT-AA    437
                     |||||||.|||||..|||||||.|||||.|||.|.|    ||||..| ||
BL01694___yce    392 ATTTCGGAATGATCGAAAATGCCTTTATACGCATCG----TCAACATGAA    437

BSNT_00512___    438 TCA-CG-AG-GAAATGCTCAAGTACAATTTGAGAGACAATTACGCCGGCA    484
                     |.| || || ||.|||.|||||||||||.||.|.|||.||||..|.||..
BL01694___yce    438 TGATCGCAGTGAGATGGTCAAGTACAATCTGCGGGACGATTATTCTGGGC    487

BSNT_00512___    485 GAACAAGCCTGATTACAGCAGAAATCTACCGCAGCGGCAGTGAGTGGAAG    534
                     |.||||||||||||.|.|..|||||.|||||...||||...||||||||.
BL01694___yce    488 GGACAAGCCTGATTGCGGGCGAAATTTACCGTGACGGCGCCGAGTGGAAA    537

BSNT_00512___    535 TTTGCAGCGATTGGTGAAGGCATGAACGATACGAG-ATTA--GAAGATAT    581
                     ||..|.||..|.||.|||||||..||||||||||| ||||  |||   ||
BL01694___yce    538 TTCACCGCTGTCGGAGAAGGCACAAACGATACGAGCATTACGGAA---AT    584

BSNT_00512___    582 TATCAGCCGATACGTATAA    600
                     ..|.|..||.||||..|.|
BL01694___yce    585 CGTTAAACGCTACGCCTGA    603


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