Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00518 and BL01699
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:09
# Commandline: needle
# -asequence dna-align/BSNT_00518___yceG.1.5803.seq
# -bsequence dna-align/BL01699___yceG.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00518___yceG-BL01699___yceG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00518___yceG-BL01699___yceG.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00518___yceG
# 2: BL01699___yceG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1725
# Identity: 1118/1725 (64.8%)
# Similarity: 1118/1725 (64.8%)
# Gaps: 231/1725 (13.4%)
# Score: 3286.5
#
#
#=======================================
BSNT_00518___ 1 ATGAGACAAGAAGAACTAACCATTCATAAAGCACTTCCGG---CTGATGG 47
||||..|||| ||| |.|..|||||.||.||.|| || .|||||.
BL01699___yce 1 ATGAATCAAG-AGA--TTAATATTCAAAACGCCCT---GGTCAATGATGA 44
BSNT_00518___ 48 CGATTGGAAAAGCCTGCTGTT--TC----AGCCATTGCCGGAGCGGGATC 91
.||.||||| ||.|.| || ||||..|.||||| |.||.|
BL01699___yce 45 TGAATGGAA------GCAGATCATCAAGAAGCCGCTCCCGGA--GAGAAC 86
BSNT_00518___ 92 AC--TATGAAACTGCACAAGGCCTTTCTTTT--------TCTCGTCTTGC 131
.| ||||||| |.|| |..||.||| .| |||||.||
BL01699___yce 87 CCCGTATGAAA----AAAA---CAGTCATTTGACGATAAGC-CGTCTGGC 128
BSNT_00518___ 132 CGGTCAGA-TATTGG------GCACGCCTATTGATGAGACGGACTACTAT 174
.||.|.|| |.|||| |||| |||||.|||||.|||||.
BL01699___yce 129 GGGACGGATTCTTGGAACTCCGCAC-------GATGAAACGGATTACTAC 171
BSNT_00518___ 175 AACGAGCTGTATGAGCTGTCTGTAAACGACC--------GCATAACGATT 216
|...|.||..|||||||||.|| ||.|| |||| .|.
BL01699___yce 172 ATATATCTCCATGAGCTGTATG----CGTCCGGTGATGTGCAT----GTG 213
BSNT_00518___ 217 TTGAGTGAAACGCTTGATAAAACAATCGAACCGGAAACATTTCAAAAGC- 265
||.||.||.|||||||||||.||.||....|||||||..|||| |.||
BL01699___yce 214 TTAAGCGAGACGCTTGATAAGACCATTTCTCCGGAAAGGTTTC--AGGCC 261
BSNT_00518___ 266 -TTCAGCATATTCATTCCATCAATCAGAAAGAAAAAGGGCTGTCAGTCAG 314
|.||||..||.|||....|.||.||||||||||||||.||.||.||||.
BL01699___yce 262 ATACAGCGGATCCATATGGTGAACCAGAAAGAAAAAGGACTTTCCGTCAA 311
BSNT_00518___ 315 CCGCTTTGTTGCCTTTTTGGACGGGGAAAAGCTGATTGCGAAGCACTCAA 364
.||.||||..||.|||.|.||||||||..||||||||.|.||||||.|..
BL01699___yce 312 TCGGTTTGCCGCTTTTCTTGACGGGGAGCAGCTGATTCCTAAGCACCCTG 361
BSNT_00518___ 365 ATCCC-CTGATGCACCGCCATTTAAGAAAAGCGC---------TGATGAC 404
||||| || ||||||||.||||||||.||.|||| ||.||..
BL01699___yce 362 ATCCCGCT-ATGCACCGGCATTTAAGGAAGGCGCTTATCGAAGTGCTGCA 410
BSNT_00518___ 405 GCTTTTACATACCTTTGCGGACAGTCATGAAAAGGGGCTGAATCATCCTG 454
|||.||.||..|||| |||||||||.||..||||..||||.|
BL01699___yce 411 GCTGTTTCAGTCCTT---------TCATGAAAAAGGATTGAACGATCCGG 451
BSNT_00518___ 455 ATTTTCGCAGAGTGCTGCTTGA---TGTC---TCGAAGTTTTCCTTAAAC 498
||||||||.|.||.||.||||| |||| |.||.| ...|||
BL01699___yce 452 ATTTTCGCCGGGTCCTCCTTGACCTTGTCAAATGGATG------GGCAAC 495
BSNT_00518___ 499 CATCTGAACCCCTGGCTGGAAAAAA----CCGA-TATAGAGCG----GGA 539
|||.||.|....|||||| ||| |||| | ||| ||.
BL01699___yce 496 CATTTGGAGAAGTGGCTG----AAAGGGGCCGACT-----GCGAAACGGC 536
BSNT_00518___ 540 GATGCCGAAGATTGTTTGGTATGGAGATGCGACGAAAAGCCAGCTCTATT 589
|||||||||..|.||||||||.||.||..|.||.||||||||.|..||||
BL01699___yce 537 GATGCCGAAAGTGGTTTGGTACGGGGACACCACCAAAAGCCAACGGTATT 586
BSNT_00518___ 590 TCTTATATTATCTGATGCTGGTCGGCTGTGATGTACTACTGTTCCATCCG 639
|.|||||.|||.|||||||.|||||.||.|||||.||.|||||.||||||
BL01699___yce 587 TTTTATACTATTTGATGCTTGTCGGATGCGATGTGCTGCTGTTTCATCCG 636
BSNT_00518___ 640 GCGGGAA---TCGATCAGCTGGC--GCTTGTCGA-CCCGAAGCAGGAGCT 683
|.||||| .||| |..|.|| |||| || |||| ||||..||||
BL01699___yce 637 GAGGGAAAAGACGA--ATTTCGCCAGCTT---GATCCCG-AGCAAAAGCT 680
BSNT_00518___ 684 CGGTTTT------ACGGAAAAGCTCCCGGATGTTTCTG----AGCTTCAG 723
...|||| ||..| ||||||....|||| || ||
BL01699___yce 681 TTCTTTTGTCTTCACATA------CCCGGACACGTCTGCATTAG----AG 720
BSNT_00518___ 724 CCGTTTCCGAAAGAAAAACCAGACCGGAAATCAACAGTGGCTTACCGCTC 773
|||||.||||..|||||.||..|.||.|||.||||.|||||.|||||.||
BL01699___yce 721 CCGTTCCCGACTGAAAAGCCCCAGCGCAAAGCAACGGTGGCGTACCGTTC 770
BSNT_00518___ 774 AACAAAGGAAATTGA-ACATGTGCTGAATCACGAGGAATCCATGCTGTAT 822
..|.|||||..|.|| || |||.|||.|..|.|||||.||..|..||||.
BL01699___yce 771 CGCGAAGGAGCTGGATAC-TGTCCTGCACAATGAGGATTCGCTAATGTAC 819
BSNT_00518___ 823 AAGCCGTGGCAGTTCAGAGATCACACACCGGTGTCCGTTACGCTGAAAAC 872
||.||.|||||||||||.||.||.||.||||..||.||.||..||||.||
BL01699___yce 820 AAACCTTGGCAGTTCAGGGAGCATACTCCGGCCTCTGTGACTTTGAAGAC 869
BSNT_00518___ 873 GACCTATGATGAATTGTTTTTAATCACGAAAGAACGCGCCTTTATTCGGC 922
.||.|||||||||.||||||||||..||||.|||||.||||||||..|.|
BL01699___yce 870 AACATATGATGAACTGTTTTTAATTGCGAAGGAACGAGCCTTTATCAGAC 919
BSNT_00518___ 923 CGAATTTCAAAGCTGATAAACATTCCA---TTGAGATTCCGAATGTATTC 969
|.|||||..|.||...|||| ||.| ||.|.|||||||||.|||||
BL01699___yce 920 CTAATTTTCAGGCGTCTAAA---TCAACGGTTAACATTCCGAATTTATTC 966
BSNT_00518___ 970 GCCAAAATTATGGGCGTGTCGAAAGACAAT---AAGGAATATTGGAACAG 1016
||.|...|.||||||||.||.| .|||| ||.||.||.|||.||.|
BL01699___yce 967 GCGATGGTCATGGGCGTCTCCA---GCAATGAAAAAGAGTACTGGGACCG 1013
BSNT_00518___ 1017 GCTTCATACTCTAGCGGATTATCAGGAAACCGAAATGGTCAGAAGCTTTC 1066
.||.||.||.||..||||.|||.||||..|..|.|.|.||.|..||||.|
BL01699___yce 1014 TCTGCAGACACTGACGGAGTATAAGGAGTCGCATACGATCCGGCGCTTCC 1063
BSNT_00518___ 1067 CATTTACAGAAGAAATA-AAGTCGAACTATCAATTTCACTACAGCCACGC 1115
|.|||||| |||.||.| |.||||||.||||||||.||.||||||.|.||
BL01699___yce 1064 CGTTTACA-AAGGAAGAGACGTCGAATTATCAATTCCATTACAGCGATGC 1112
BSNT_00518___ 1116 ACTTGATCAAGAAGGGAACATTGATCCGGACAAGC----TGATGGCAAGC 1161
.|||||||||...||||..||.|||| ||.|| |.||||..|||
BL01699___yce 1113 GCTTGATCAAACGGGGATGATCGATC----CAGGCCGTTTAATGGAGAGC 1158
BSNT_00518___ 1162 AATGTGTGGCAGTACAAACAGCTGCCGGCGGGCGTTCAGACTGCCATTGC 1211
|||.|.||||..|||||.||.|||||.|.|||.||.|||...|.||||||
BL01699___yce 1159 AATATATGGCGCTACAAGCATCTGCCTGAGGGAGTACAGCGAGGCATTGC 1208
BSNT_00518___ 1212 CAAAACGATTTCGAGAATGTGCAGGCACCCGCGGCTTAAA-------GCT 1254
|.||.||.||||.||.|||||||....|||| || |||
BL01699___yce 1209 CCAAGCGGTTTCCAGGATGTGCAAAAGCCCG-------AAGATGCTGGCT 1251
BSNT_00518___ 1255 TTGCATCAGGAACAAGTCAAG--GATGTTCAAATCTATTTGTTTAAACAA 1302
|||.|..|.||| |||.| || |||||.||..|.||||||||||..|||
BL01699___yce 1252 TTGAACAATGAA-AAGAC-AGCCGATGTACAGCTGTATTTGTTTACCCAA 1299
BSNT_00518___ 1303 ACAACAAACCTGCCTGCTAATCTGCTGAAATTGATTCAAATGTTCGACTA 1352
.|...|.|.||.||.||....||..||||..|||||||.|..||.|||||
BL01699___yce 1300 GCGGTACAGCTTCCGGCAGCGCTATTGAATATGATTCAGACATTTGACTA 1349
BSNT_00518___ 1353 TGCGCAAACCGTTCCGAAACTCGTTTTATATCATACGGAAATGAGCGGCG 1402
|.|.||.|||||.|||||.||..|.||.|||||.||||||..|| ||| |
BL01699___yce 1350 TTCACAGACCGTGCCGAAGCTGATCTTGTATCACACGGAACAGA-CGG-G 1397
BSNT_00518___ 1403 G--ACTCGCGCGTTCGGATGCTGCCGCCCTGCTGTTCCTGAATGAAATCG 1450
| ||||.|.||.|||||.||.||||||.||||.||..|.||||||||||
BL01699___yce 1398 GACACTCACCCGGTCGGACGCGGCCGCCTTGCTTTTGTTAAATGAAATCG 1447
BSNT_00518___ 1451 GAATCGATATCATCATTTATAATCCGCCCGGACACCAAG-ATATTGAGCA 1499
|.||.||.||.|||||.|||||||||||.||.|| .||| .||||||.||
BL01699___yce 1448 GCATTGACATTATCATCTATAATCCGCCGGGCCA-TAAGTGTATTGACCA 1496
BSNT_00518___ 1500 GTTTATTGA-AGAGGACCAGTATGATATCCACTGGCTGGATGACATGGTG 1548
.|.|||.|| || |.|.||.|.|||||.|||.|||||.|||||.|| ||.
BL01699___yce 1497 CTATATCGACAG-GCAGCACTTTGATACCCATTGGCTTGATGAAAT-GTC 1544
BSNT_00518___ 1549 TTTC-AGCAGGACTACAAAGAGCCTTCGCTTGT---GAAAAGGCTCTTCA 1594
.||| |.|||||.|..||||||||.||..|.|| ||| |.||.|||
BL01699___yce 1545 CTTCAACCAGGAGTTTAAAGAGCCGTCAATCGTCCGGAA---GTTCATCA 1591
BSNT_00518___ 1595 GAACCATTACCCAAAAA-----TAA 1614
|| |||| |||
BL01699___yce 1592 -----AT------AAAATCTTTTAA 1605
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