Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00541 and BL01703
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:10
# Commandline: needle
# -asequence dna-align/BSNT_00541___ldh.1.5803.seq
# -bsequence dna-align/BL01703___ldh.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00541___ldh-BL01703___ldh.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00541___ldh-BL01703___ldh.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00541___ldh
# 2: BL01703___ldh
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 991
# Identity: 742/991 (74.9%)
# Similarity: 742/991 (74.9%)
# Gaps: 56/991 ( 5.7%)
# Score: 2727.5
#
#
#=======================================
BSNT_00541___ 1 ATGATGAACAAACATGTAAA---TAAAGTAGCTTTAATCGGAGCGGGTTT 47
||||..|||.||.|.||.|| ||.||| |||.|||||.||||||||
BL01703___ldh 1 ATGAGAAACCAAAAAGTCAATCGTACAGT---TTTGATCGGTGCGGGTTT 47
BSNT_00541___ 48 TGTTGGAAGCAGTTATGCATTTGCGTTAATTAACCAAGGGATCACAGATG 97
||||||||||||.|||||||||.||||||||||||||||.||||||||.|
BL01703___ldh 48 TGTTGGAAGCAGCTATGCATTTACGTTAATTAACCAAGGTATCACAGACG 97
BSNT_00541___ 98 AGCTTGTGGTCATTGATGTAAATAAAGAAAAAGCAATGGGCGATGTGATG 147
|.||||||.||||||||.||||||||||.|||||||||||||||||.|||
BL01703___ldh 98 AACTTGTGATCATTGATTTAAATAAAGACAAAGCAATGGGCGATGTTATG 147
BSNT_00541___ 148 GATTTAAACCACGGAAAGGCGTTTGCGCCACAACCGGTCAAAACATCTTA 197
|||.|.||||||||.||.||.|||||.||.||.||.||.|||||||..||
BL01703___ldh 148 GATCTCAACCACGGTAAAGCATTTGCTCCGCATCCTGTGAAAACATGGTA 197
BSNT_00541___ 198 CGGAACATATGAAGACTGCAAGGATGCTGATATTGTCTGCATTTGCGCCG 247
|||.||||||||.||||||||.||.|||||||||||||||.|.|||||||
BL01703___ldh 198 CGGCACATATGATGACTGCAAAGAAGCTGATATTGTCTGCGTATGCGCCG 247
BSNT_00541___ 248 GAGCAAACCAAAAACCTGGTGAGACACGCCTTGAATTAGTAGAAAAGAAC 297
||||.||||||||.||.|||||.||.||||||||..||||.|||||||||
BL01703___ldh 248 GAGCGAACCAAAAGCCGGGTGAAACCCGCCTTGATCTAGTCGAAAAGAAC 297
BSNT_00541___ 298 TTGAAGATTTTCAAAGGCATCGTCAGTGAGGTCATGGCGAGCGGATTTGA 347
|||||.|||||.|||||.|||.||.|.||.||||||||.|||||.|||||
BL01703___ldh 298 TTGAAAATTTTTAAAGGAATCATCGGAGAAGTCATGGCCAGCGGTTTTGA 347
BSNT_00541___ 348 CGGCATTTTCTTAATCGCGACAAATCCGGTTGATATCCTGACTTACGCAA 397
||||||.|||.|..||||.|||||.||.||.||.|||.|||||||.||.|
BL01703___ldh 348 CGGCATCTTCCTCGTCGCTACAAACCCTGTCGACATCTTGACTTATGCGA 397
BSNT_00541___ 398 CATGGAAATTTAGCGGCCTGCCAAAAGAGCGGGTGATCGGAAGCGGCACA 447
|.||||||||.||||||||.||||||||.||.||.|||||||||||||||
BL01703___ldh 398 CTTGGAAATTCAGCGGCCTTCCAAAAGAACGCGTCATCGGAAGCGGCACA 447
BSNT_00541___ 448 ACACTAGATTCTGCGAGATTCCGTTTCATGCTGAGCGAATACTT---TGG 494
||.||.||..||||..|.|||||.|.|.||||.|||||.||.|| ||.
BL01703___ldh 448 ACGCTTGACACTGCCCGTTTCCGCTACTTGCTCAGCGAGTATTTCGGTGT 497
BSNT_00541___ 495 CGCAGCGCCTCAAAACGTACACGCGC-ATATTATCGGAGAGCACGGCGAC 543
|||.|| ||.|||..|| |||| || ||||.||.||.||.|||||.||.
BL01703___ldh 498 CGCTGC-CCACAATGCG--CACG-GCTATATCATTGGTGAACACGGAGAT 543
BSNT_00541___ 544 ACAGAGCTTCCTGTTTGGAGCCACGCGAATGTCGGCGGTGTGCCGGTCAG 593
||.|||||.|||||.||||||||.||||||.|||||||.||.||.|||||
BL01703___ldh 544 ACGGAGCTGCCTGTCTGGAGCCATGCGAATATCGGCGGAGTTCCCGTCAG 593
BSNT_00541___ 594 TGAACTCGTTGAGAAAAACGATGCG---TACAAACAAGAGGAGCTGGACC 640
.| |||.|.|||.||.|| |||.| ||||||...||.||.||.||..
BL01703___ldh 594 CG-ACTTGCTGAAAAGAA--ATGAGAAATACAAAGCGGAAGATCTAGATG 640
BSNT_00541___ 641 AAATTGTAGATGATGTGAAAAACGCAGCTTACCATATCATTGAGAAAAAA 690
||.|..|.||..||||.||||||||.||||||||.||.||||||||||||
BL01703___ldh 641 AACTGTTTGACAATGTAAAAAACGCCGCTTACCACATTATTGAGAAAAAA 690
BSNT_00541___ 691 GGCGCGACTTATTATGGGGTTGCGATGAGTCTTGCTCGCATTACAAAAGC 740
||||||||.||.||.||.|||||.|||||.||.||.||.|||||.|||||
BL01703___ldh 691 GGCGCGACATACTACGGAGTTGCCATGAGCCTCGCACGTATTACGAAAGC 740
BSNT_00541___ 741 CATTCTTCATAATGAAAACAGC-ATATTAACTGTCAGCACATATTTGGAC 789
.|||..||..||||||.| ||| ||.||.||.||.|||.|..||.|.||.
BL01703___ldh 741 GATTTATCGAAATGAAGA-AGCAATTTTGACCGTGAGCGCTCATCTTGAT 789
BSNT_00541___ 790 GGGCAATACGGTGCAGATGACGTGTACATCGGTGTGCCGGCTGTCGTGAA 839
||..|||..||.|.|.||||.||.||.|||||.||.|||||.||.||...
BL01703___ldh 790 GGTGAATTTGGAGAAAATGATGTTTATATCGGAGTTCCGGCGGTTGTCGG 839
BSNT_00541___ 840 CC---GCGGAGGGATCGCAGGTATCACTGAGCT-GAACTTAAATGAGAAA 885
|| ||||||.||..|.| ||...|||||| ||.| |.||.||.||.
BL01703___ldh 840 CCGATGCGGAGCGAGGGAA---ATTGTTGAGCTCGATC-TGAACGAAAAG 885
BSNT_00541___ 886 GAAAAAGAACAGTTCCTTCACAGCGCCGGCGTCCTTAAAAAC-ATTTTAA 934
||||||.||||.|||...||.|||||.||.|| .||||||.| |||||||
BL01703___ldh 886 GAAAAACAACAATTCAAGCATAGCGCAGGTGT-GTTAAAAGCAATTTTAA 934
BSNT_00541___ 935 AACCTCATTT-----TGCAG----AACAAAAAGTCAACTAA 966
||||.||||| ||||| ||
BL01703___ldh 935 AACCGCATTTTGAACTGCAGGCGTAA--------------- 960
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