Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00543 and BL01704
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:10
# Commandline: needle
# -asequence dna-align/BSNT_00543.1.5803.seq
# -bsequence dna-align/BL01704___lctP.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00543-BL01704___lctP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00543-BL01704___lctP.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00543
# 2: BL01704___lctP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1690
# Identity: 856/1690 (50.7%)
# Similarity: 856/1690 (50.7%)
# Gaps: 530/1690 (31.4%)
# Score: 2639.5
#
#
#=======================================
BSNT_00543 0 -------------------------------------------------- 0
BL01704___lct 1 ATGAAAATGTGGCAGCAGATATACGATCCGTTTGGAAATCTGTTTATCAG 50
BSNT_00543 0 -------------------------------------------------- 0
BL01704___lct 51 CGCTTTTGCCGCCATACTGCCGATTCTTTTCTTTCTTCTTGCACTGACCG 100
BSNT_00543 0 -------------------------------------------------- 0
BL01704___lct 101 TGTTGAAGATGAAAGGAATCATTGCGTCATTTTTGACGCTGGCGGTCAGC 150
BSNT_00543 0 -------------------------------------------------- 0
BL01704___lct 151 TTTATTGTAGCGGTGTTCTTCTTTCACATGCCGGCTGCGAAAGCTGTCTC 200
BSNT_00543 0 -------------------------------------------------- 0
BL01704___lct 201 CGCCGTTTTACTTGGAATTGCTAACGGCCTTTGGCCGATCGGATATATTG 250
BSNT_00543 0 -------------------------------------------------- 0
BL01704___lct 251 TCCTGATGGCTGTATGGCTTTACAAAATTTCTGTCAAAACCGGAAAGTTT 300
BSNT_00543 0 -------------------------------------------------- 0
BL01704___lct 301 AAAGTGATCAGAGCGAGCATTGCCGGAATTTCGTCCGACCAGCGGCTTCA 350
BSNT_00543 0 -------------------------------------------------- 0
BL01704___lct 351 GCTATTGCTGATCGGGTTCAGTTTTAACGCCTTTTTGGAAGGTGCGGCAG 400
BSNT_00543 1 ---TTGGTGTTCCGATTG------GCGGCG--CTGCTCGTCGAACTTGGT 39
|.|||||.||||||| |||.|| ||.||.|||||.||||||
BL01704___lct 401 GCTTCGGTGTGCCGATTGCGATCAGCGCCGTTCTTCTTGTCGAGCTTGGT 450
BSNT_00543 40 TTTAAACCGTTAAAAGCGGCAGCGCTCTGCTTGATTGCAAACGCAGCCTC 89
||||||||.||.|||||||||.|.||.||.||.||.||.||.||.||.||
BL01704___lct 451 TTTAAACCTTTGAAAGCGGCATCCCTATGTTTAATAGCGAATGCGGCATC 500
BSNT_00543 90 CGGAGCCTTTGGGGCGATCGGAATTCCTGTCATCACAGGGGCACAGATTG 139
||||||||||||.||.|||||||||||.||.||||||||.||.|||||.|
BL01704___lct 501 CGGAGCCTTTGGAGCCATCGGAATTCCGGTTATCACAGGAGCGCAGATGG 550
BSNT_00543 140 G-----TAATTTGTCTGCTCTTGAGCTGTCACGGA-------CATTAATG 177
| ||| |..|..|||||||.|| |.|| |.||.|||
BL01704___lct 551 GAGGCTTAA-----CACCGGTTGAGCTTTC-CAGAACGCTCGCTTTGATG 594
BSNT_00543 178 TGGACACTGCCGATGATCTCATTTTTAATACCATTCCTGCTTGTATTCTT 227
||||||.|.|||.|.||.||..|.||.||||||||.||.|||.|
BL01704___lct 595 ------CTGCCGGTCATCGCTTTCTTTGTCCCGTTCCTGCTCGTTTTCAT 638
BSNT_00543 228 ATTAGACCGAATGAAAGGAATCAAACAGACATG--GCCCGCTCTTCTGGT 275
|||.|||.|..|.|||||||| ||..||.|.| |||.||||||||.||
BL01704___lct 639 ATTGGACGGGTTTAAAGGAAT--AAGGGAAACGCTGCCGGCTCTTCTCGT 686
BSNT_00543 276 TGTGAGCGGTGGGTATACAGCGGTTCAGACACTGACAATG--GCGGTGCT 323
..|.|||||..|.|||||.|||||.|||||..|.|||||| ..|.| |
BL01704___lct 687 ATTAAGCGGAAGCTATACGGCGGTGCAGACTTTAACAATGATTAGTT--T 734
BSNT_00543 324 CGGGCCGGAATTAGCAAACATTTTGGCGGCCTTATTCAGCATGGGCGGGC 373
.||||||||..|.||..||||||||||.||.|||.||||||||||.|.||
BL01704___lct 735 GGGGCCGGAGCTTGCCGACATTTTGGCCGCTTTAATCAGCATGGGAGCGC 784
BSNT_00543 374 TTGCCCTCTTCCTCCGCAAA--TGGCAGCCGAAAGAGATTTACCGCGAGG 421
|.||.||.|| |..|.||| |||||||||....|.||.|||.| ||
BL01704___lct 785 TGGCGCTGTT--TTTGAAAAAGTGGCAGCCGCGCCACATATACAG---GG 829
BSNT_00543 422 AAGGGGCCGGCGATG--CTGGTG-----AGAAAAAGGCATACCGTGCTGC 464
|| .||||..||| |..||| .||||| |||.|||||.||
BL01704___lct 830 AA---ACCGGGAATGAACATGTGCCCGCTGAAAA----ATATCGTGCAGC 872
BSNT_00543 465 TGATATTGCGAAAGCGTGGTCTCCTTTCTACATTTTAACTGCGGCGATCA 514
.||.|||..|||.||.|||||.||.||.||.|||||.||.||.|..||..
BL01704___lct 873 AGACATTATGAACGCTTGGTCACCGTTTTATATTTTGACCGCCGTCATTG 922
BSNT_00543 515 CCATCTGGAGCCTTCCTGCCTTCAAAGCGCTTTTCCAAGAAGGCGGGCTG 564
|..|.||||||||.||.|..||.||.|.||||||.||.||||||||..|.
BL01704___lct 923 CGGTGTGGAGCCTGCCCGGTTTTAAGGGGCTTTTTCAGGAAGGCGGATTC 972
BSNT_00543 565 TTATATCAATCAACGCTCCTGTTCAAAATGCCTTTTCTGCATCAGCAAAT 614
.|..|.|||.|.||..|..|.|||||.|||||||||||.||.|.|.||.|
BL01704___lct 973 CTGAAGCAAACGACAATTTTATTCAACATGCCTTTTCTTCACCGGGAAGT 1022
BSNT_00543 615 TATGAAAATGCCGCCGATTGCGCCATCTGC----CATG--CCGTTAGATG 658
..||||||.||||||||| ||||.| ||.| |||.|.||||
BL01704___lct 1023 GCTGAAAACGCCGCCGAT------ATCTCCGGAACAGGCACCGCTTGATG 1066
BSNT_00543 659 CAGTCTTTAAAGTTGATCTGC-TGTCAGCGACTGGAACATCGA---TTTT 704
|.||..|.||..|||| ||.| |.||||||||.||.||..||| |..|
BL01704___lct 1067 CTGTGATGAAGCTTGA-CTTCATTTCAGCGACGGGTACGGCGATCCTGAT 1115
BSNT_00543 705 AGCGGCGGTCATCGTGACAGGGCTGTTCAGCAAAAATTTCTCTTGTCG-G 753
.||||.|.|||||..||..| ||.|.|||..|||..||..||..|| |
BL01704___lct 1116 CGCGGTGATCATCACGATTG---TGATGAGCCGAAACATCAGTTTCCGCG 1162
BSNT_00543 754 GATGCCTTTGC-TTCCTTGAAGGAGACAGGAAAAGAGCTGTGGGTGCCGA 802
||.|.||||.| .|| ||||.|||||.|..||.||.||||||.|.||..
BL01704___lct 1163 GAGGACTTTCCAGTC--TGAAAGAGACGGTCAAGGAACTGTGGCTTCCCG 1210
BSNT_00543 803 TTATGACGATCTGCTTCGTGATGGGGTTTGCCAATCTGGCCAACTTCGCA 852
||.|.||.||.|||||.||||||||.|||||.||..|||||||.|..||.
BL01704___lct 1211 TTCTCACCATTTGCTTTGTGATGGGTTTTGCAAACTTGGCCAATTATGCC 1260
BSNT_00543 853 GGGCTCAGCTCTTCAATTGGGTT--AGCAT-----TGGCG------AAAA 889
|| ||||.||| |.||| ||||| |||.
BL01704___lct 1261 GG-------------ATTGAGTTCAACCATCGGACTGGCGCTCGCCAAAG 1297
BSNT_00543 890 CAGGAGACCTGTTCCCGTTTGTCAGTCCTGTTCTCGGCTGGATTGGCGTG 939
|.||.||..|.||.|||||.||||||||.||..|.||||||||.||.||.
BL01704___lct 1298 CGGGGGATATCTTTCCGTTCGTCAGTCCCGTATTGGGCTGGATCGGTGTC 1347
BSNT_00543 940 TTCATCACCGGTTCTGTTGTCAGCAATAATGCTTTGTTCGGCCATTTGCA 989
||.|||||.|||||.||.||||||||.||.||.||.||||||||..||||
BL01704___lct 1348 TTTATCACAGGTTCAGTCGTCAGCAACAACGCATTATTCGGCCACCTGCA 1397
BSNT_00543 990 GGTTGTCACGGGAGCGCAGATCGGTGCGGGTTCAGATTTGCTGTTAGCCG 1039
.|..|||||.||||||||.|||||..|..||||.|.|||||||.|.||||
BL01704___lct 1398 AGCAGTCACCGGAGCGCAAATCGGGACAAGTTCGGCTTTGCTGCTTGCCG 1447
BSNT_00543 1040 CAAATACGGCGGGCGGTGTCATGGCGAAACTTGTTTCTCCTCAATCTATC 1089
|||||||.|||||.||.||.|||||.||.||..|.||.||.||.||.||.
BL01704___lct 1448 CAAATACCGCGGGAGGCGTGATGGCCAAGCTGATCTCACCGCAGTCGATT 1497
BSNT_00543 1090 GCCATCGCTGCCGCAGCGGTCGGCCAA----ACAGGCAAGGAATCTAAAC 1135
||.||.||..|.||.||||| .|| |||||..|||||||.||.|
BL01704___lct 1498 GCGATTGCAACAGCCGCGGT----TAAAGAGACAGGGCAGGAATCAAAGC 1543
BSNT_00543 1136 TGTTTA---AAAGGACAGTGGCGTACAGCCTGATTCTGTTATTGATCATT 1182
|.||.| || ||.||....|||||||||.|||||.|.||.||||||
BL01704___lct 1544 TTTTCAGCCAA---ACCGTTAAATACAGCCTGGTTCTGCTTTTCATCATT 1590
BSNT_00543 1183 TGTATATGGATGTTTATTCT-TGCAAGATTAGGAGTGTAA 1221
||.||.||||.||||...|| |..|||.|| ||..|.|||
BL01704___lct 1591 TGCATTTGGACGTTTGCGCTATCAAAGCTT-GGCATATAA 1629
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