Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00558 and BL01707
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:10
# Commandline: needle
# -asequence dna-align/BSNT_00558___aroK.1.5803.seq
# -bsequence dna-align/BL01707___aroK.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00558___aroK-BL01707___aroK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00558___aroK-BL01707___aroK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00558___aroK
# 2: BL01707___aroK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 578
# Identity: 403/578 (69.7%)
# Similarity: 403/578 (69.7%)
# Gaps: 61/578 (10.6%)
# Score: 1335.5
#
#
#=======================================
BSNT_00558___ 1 ATGAACGCTAAACGAGCCATCCCAGTAAGAGA-AAGAAATATCGTCCTGA 49
|||||.|| |.||.||||||| ||| |||||.||.||||
BL01707___aro 1 ATGAATGC------------CGCAATAAGAGATAAG-AATATTGTGCTGA 37
BSNT_00558___ 50 TCGGATTCATGGGTGTAGGAAAAACAACAATCGGCCAATTGGTCGCTAAA 99
||||.||.|||||.||.|||||||||||.||||||||..|.||..|.||.
BL01707___aro 38 TCGGGTTTATGGGCGTCGGAAAAACAACCATCGGCCAGCTTGTGTCAAAG 87
BSNT_00558___ 100 AAATTATATAGAGATTTTATTGATATTGACCAGCAGATCGAAAAGGA-TT 148
||||||....|.||.|||||.|||||.|||||..||||||||||.|| ||
BL01707___aro 88 AAATTAGGCCGTGACTTTATCGATATCGACCACGAGATCGAAAAAGACTT 137
BSNT_00558___ 149 TCAATATGTCAATTCCTGAGATATTTGAG-AAAAAGGGAGAAGACTTTTT 197
|||| |||.|.|||||.|||||.|||.|| |||||||| ||||..|||||
BL01707___aro 138 TCAA-ATGACCATTCCGGAGATGTTTCAGCAAAAAGGG-GAAGCGTTTTT 185
BSNT_00558___ 198 CCGGAAAACGGAGAAGGAATATATTTTAGACATCTGCCATCATAAACGAT 247
|.|..|.|||||.||.|||||||||||..|.||.|||.|.||| ||.||
BL01707___aro 186 CAGACAGACGGAAAAAGAATATATTTTTCAGATGTGCGAACAT--ACAAT 233
BSNT_00558___ 248 --TCAAAATCGTATCTCT----GGGCGGGGGATCTTTTAAACAAGAAGAA 291
.|||.|||||||| || ||||||.| |||||.|.||.||.|||
BL01707___aro 234 GGGCAACATCGTATC-CTTAGGGGGCGGCG---CTTTTCAGCAGGAGGAA 279
BSNT_00558___ 292 ATCAGAAATTGCTGTCTGGAAAACTG---TCTCGTGCTTCATCTGGACCT 338
||||||||....||.||.|||.|||| |.||.| ||| |||.||..|
BL01707___aro 280 ATCAGAAAGAAGTGCCTCGAACACTGCTTTGTCAT-CTT--TCTTGATTT 326
BSNT_00558___ 339 GTCATGGGAGAACTGGAAGCAGCGCGCGGATTTATTGATCGAAAGCCGCC 388
...|||||||||.|||||||||||...||||.|.|||||.||||.|.|.|
BL01707___aro 327 AAGATGGGAGAATTGGAAGCAGCGGATGGATCTCTTGATTGAAAACAGGC 376
BSNT_00558___ 389 CTGTACTGCATAACCGTTCAATGGATGAAATGGAACAGCTGTTTAACGAA 438
|.||.||.||||||||..||||.||.||||||.||||||||||.||.|||
BL01707___aro 377 CGGTTCTTCATAACCGCACAATTGAAGAAATGAAACAGCTGTTCAATGAA 426
BSNT_00558___ 439 AGAAA-AGTCATTTATGACA-AGCACAATTCAAAAGTGGCAACAGACAAC 486
||||| || |||||||| || ..|||.|||.||||||||.|||.||.|||
BL01707___aro 427 AGAAAGAG-CATTTATG-CATTTCACCATTTAAAAGTGGAAACCGATAAC 474
BSNT_00558___ 487 CTTTCCCCGGAAGAGGTTGCCGATTACATTGTTGAGACATTAAAAATTGG 536
|..||..|.|||||....|||||.||.|||||.||||...|||| |
BL01707___aro 475 CGGTCTGCCGAAGAAACGGCCGACTATATTGTGGAGATGCTAAA-----G 519
BSNT_00558___ 537 CTGGG---ATCTTTATCAGCCGATGTAA 561
||.|| |||||.|
BL01707___aro 520 CTTGGTCAATCTTAA------------- 534
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