Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00569 and BL01710
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:11
# Commandline: needle
# -asequence dna-align/BSNT_00569___ycgN.1.5803.seq
# -bsequence dna-align/BL01710___ycgN.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00569___ycgN-BL01710___ycgN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00569___ycgN-BL01710___ycgN.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00569___ycgN
# 2: BL01710___ycgN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1565
# Identity: 1232/1565 (78.7%)
# Similarity: 1232/1565 (78.7%)
# Gaps: 31/1565 ( 2.0%)
# Score: 4746.5
#
#
#=======================================
BSNT_00569___ 1 ATGACAACACCTTACAAACACGAGCCATTCACAAATTTCCAAGATC-AAA 49
|||||||||||||||||||||||.|||||.|||||||| |..|||| ||.
BL01710___ycg 1 ATGACAACACCTTACAAACACGAACCATTTACAAATTT-CGGGATCGAAG 49
BSNT_00569___ 50 ACAACGTGGAA-GCGTTTAAAAAAGCGCTTGCGACAGTA---AGCGAATA 95
|.||| .|||| ||.||..|||||||.||.|..||.||| |.|||||.
BL01710___ycg 50 AAAAC-CGGAAGGCATTCGAAAAAGCTCTGGAAACGGTAAATAACGAATG 98
BSNT_00569___ 96 TTTAGGAAAAGACTATCCGCTTGTCATTAACGGCGAGAGAGT-GGAAACG 144
..|.||..|...||||||.|||||.||..|.||.||.|| || .||||||
BL01710___ycg 99 GCTGGGTCAGTCCTATCCTCTTGTTATCGATGGAGAAAG-GTATGAAACG 147
BSNT_00569___ 145 GAAGCGAAAATCGTTTCAATCAACCCGGCTGATAAAGAAGAAGTCGTCGG 194
|||...||.|||||.||.||||||||.||..|.|||||||||||.||.||
BL01710___ycg 148 GAAAACAAGATCGTATCGATCAACCCTGCAAACAAAGAAGAAGTTGTAGG 197
BSNT_00569___ 195 C-CGAGTGTCAAAAGCGTCTCAAGAGCACGCTGAGCAAGCGATTCAAGCG 243
| || ||.||.||.||..||||.||.||.||.||..|.||.|||||.|||
BL01710___ycg 198 CACG-GTATCCAAGGCTACTCAGGATCATGCGGAAAAGGCCATTCAGGCG 246
BSNT_00569___ 244 GCTGCAAAAGCATTTGAAGAGTGGAGATACACGTCTCCTGAAGAGAGAGC 293
|||||.|||||.||||||...|||||||||||...|||||||||.|||||
BL01710___ycg 247 GCTGCGAAAGCGTTTGAAACTTGGAGATACACAGATCCTGAAGAAAGAGC 296
BSNT_00569___ 294 GGCTGTCCTGTTCCGCGCTGCTGCCAAAGTCCGCAGAAGAAAACATGAAT 343
||||||..|.||||||||.|.|||||||||.|||.|.|.|||.|||||.|
BL01710___ycg 297 GGCTGTTTTATTCCGCGCGGTTGCCAAAGTGCGCCGCAAAAAGCATGAGT 346
BSNT_00569___ 344 TCTCAGCTTTGCTT---GTGAAAGAAGCAGGAAAGCCTTGGAACGAGGCG 390
||||.|| |||| ||.||||||||||||||.||||||||.||.|||
BL01710___ycg 347 TCTCTGC---GCTTTTAGTCAAAGAAGCAGGAAAACCTTGGAATGAAGCG 393
BSNT_00569___ 391 GATGCCGATACGGCTGAAGCGATTGACTTCATGGAGTATTATGCACGTCA 440
|||||.||||||||.||||||||.||.||.|||||.||.|||||.||.||
BL01710___ycg 394 GATGCGGATACGGCAGAAGCGATCGATTTTATGGAATACTATGCGCGGCA 443
BSNT_00569___ 441 AATGATCGAACTGGCAAAAGGCAAACCGGTCAACAGCCGTGAAGGCGAGA 490
||||||.||.||.||.|||||.||.|||||.|||||||||||||||||..
BL01710___ycg 444 AATGATTGAGCTTGCGAAAGGAAAGCCGGTTAACAGCCGTGAAGGCGAAC 493
BSNT_00569___ 491 AAAACCAATATGTATACACGCCGACTGGAGTGACAGTCGTTATCCCGCCT 540
.|||.||||||||.|||||.||||||||.||.||.||.|||||.||||||
BL01710___ycg 494 GAAATCAATATGTGTACACACCGACTGGTGTTACGGTTGTTATTCCGCCT 543
BSNT_00569___ 541 TGGAACTTCTTGTTTGCGATCATGGCAGGCACAACAGTGGCGCCGATCAT 590
|||||||||.||||.|||||||||||.||.||.|||||.|||||||||.|
BL01710___ycg 544 TGGAACTTCCTGTTCGCGATCATGGCCGGAACGACAGTTGCGCCGATCGT 593
BSNT_00569___ 591 TACTGGAAACACAGTGGTTCTGAAACCTGCGAGTGCTACACCTGTTATTG 640
.||.|||||||||||.||.|||||.|||||.||.||..|.|||||.||||
BL01710___ycg 594 GACAGGAAACACAGTTGTACTGAAGCCTGCAAGCGCAGCGCCTGTCATTG 643
BSNT_00569___ 641 CAGCAAAATTTGTTGAGGTGCTTGAAGAGTCCGGATTGCCAAAAGGCGTA 690
|.|||||.||||||||.|||||||||||...||||.|.||||||||.|||
BL01710___ycg 644 CCGCAAAGTTTGTTGAAGTGCTTGAAGAAAGCGGACTTCCAAAAGGAGTA 693
BSNT_00569___ 691 GTCAACTTTGTTCCGGGAAGCGGAGCGGAAGTAGGCGACTATCTTGTTGA 740
||||||||.||.||.|||||||||||.|||||.||.||.|||.|.||.||
BL01710___ycg 694 GTCAACTTCGTCCCTGGAAGCGGAGCTGAAGTCGGGGATTATTTGGTGGA 743
BSNT_00569___ 741 CCATCCGAAAACAAGCCTTATCACATTTACGGGATCAAGAGAAGTTGGTA 790
||||||||||||||||.|.||.||.|||||.||.|||||.|||||.||.|
BL01710___ycg 744 CCATCCGAAAACAAGCATCATTACGTTTACCGGTTCAAGGGAAGTCGGAA 793
BSNT_00569___ 791 CGAGAATTTTCGAACGCGCGGCGAAGGTTCAGCCAGGCCAGCAGCACTTT 840
||.|.|||||.||.||.||.||||||||||||||.||.|||...|||||.
BL01710___ycg 794 CGCGCATTTTTGAGCGTGCAGCGAAGGTTCAGCCTGGTCAGACCCACTTA 843
BSNT_00569___ 841 AAGCGTGTCATCGCTGAAATGGGCGGTAAAGATACGGTTGTTGTCGATGA 890
||.|..||.||||||||.||||||||.|||||||||||.||.||.|||||
BL01710___ycg 844 AAACAAGTGATCGCTGAGATGGGCGGAAAAGATACGGTCGTCGTTGATGA 893
BSNT_00569___ 891 GGA-TGCGGACATTGAATTAGCGGCTCAATCGATCTTTACTTCAGCATTC 939
.|| || .||.||||||||.||.||.|||||.||.||.||.||.||.|||
BL01710___ycg 894 AGACTG-TGATATTGAATTGGCTGCACAATCAATTTTCACATCTGCCTTC 942
BSNT_00569___ 940 GGCTTTGCGGGACAAAAATGCTCTGCAGGTTCACGTGCAGTAGTTCATGA 989
||||||||.||.||||||||.||.|||||||||||.||.||.||.|||||
BL01710___ycg 943 GGCTTTGCAGGCCAAAAATGTTCAGCAGGTTCACGGGCTGTCGTGCATGA 992
BSNT_00569___ 990 AAAAGTGTATGATCAAGTATTAGAGCGTGTCATTGAAATTACGGAATC-- 1037
|||.||.|||||..|||||||..||||.||.||||||||||||||.||
BL01710___ycg 993 AAAGGTATATGACGAAGTATTGAAGCGCGTGATTGAAATTACGGAGTCCA 1042
BSNT_00569___ 1038 -AAAAGTAACAGCTAAACCTGACAGTGCAGATGTTTATATGGGACCTGTC 1086
.|||||...|| |.||.|||||.||.||.|||||.||||||||||||
BL01710___ycg 1043 AGAAAGTCGGAG---AGCCCGACAGCGCGGACGTTTACATGGGACCTGTC 1089
BSNT_00569___ 1087 ATTGACCAAGGTTCTTATGATAAAATTATGAGCTATATTGAGATCGGAAA 1136
||.||.||.|..||.|.|.|.|||||.|||..||||||.||.||||||||
BL01710___ycg 1090 ATCGATCAGGCATCCTTTAACAAAATCATGGACTATATCGAAATCGGAAA 1139
BSNT_00569___ 1137 ACAGGAAGGGCGTTTAGTAAGCGGCGGTACCGGTGATGATTCGAAAGGAT 1186
|.|.|||||.||.|||||.|||||.||.|..||.||||||||.|||||.|
BL01710___ycg 1140 AGAAGAAGGCCGCTTAGTCAGCGGAGGAAAAGGCGATGATTCAAAAGGCT 1189
BSNT_00569___ 1187 ACTTCATCAAACCGACGATCTTCGCTGACCTTGATCCGAAAGCAAGACTC 1236
||||||||.|||||||||||||.||.||..|.|||||||||||..|..|.
BL01710___ycg 1190 ACTTCATCGAACCGACGATCTTTGCCGATTTAGATCCGAAAGCCCGGTTA 1239
BSNT_00569___ 1237 ATGCAGGAAGAAATTTTCGGACCTGTCGTTGCATTTTGTAAAGT--GTCA 1284
||||||||||||||||||||||||||.|||||.||.|..||||| | ||
BL01710___ycg 1240 ATGCAGGAAGAAATTTTCGGACCTGTTGTTGCTTTCTCAAAAGTAAG-CA 1288
BSNT_00569___ 1285 GACTTTGATGAAGCTTTAGAAGTGGCAAACAATACTGAATATGGTTTGAC 1334
| |||||||||.||..|.|||||.||.|||||.||.|||||.||..||||
BL01710___ycg 1289 G-CTTTGATGAGGCGCTGGAAGTTGCCAACAACACCGAATACGGCCTGAC 1337
BSNT_00569___ 1335 AGGCGCGGTTATCACAAACAACCGCAAGCACATCGAGCGTGCGAAACAGG 1384
|||||||||.||.||.||.||||||.|.||.|||.|..|.||.|||||.|
BL01710___ycg 1338 AGGCGCGGTCATTACTAAAAACCGCGATCATATCAACAGGGCAAAACAAG 1387
BSNT_00569___ 1385 AATTCCATGTCGGAAACCTATACTTCAACCGCAACTGTACAGGTGCTATC 1434
||||||||||||||||.||.||.||||||||||||||||||||.||.|||
BL01710___ycg 1388 AATTCCATGTCGGAAATCTGTATTTCAACCGCAACTGTACAGGGGCGATC 1437
BSNT_00569___ 1435 GTCGGCTACCATCCGTTTGGCGGCTTCAAAATGTCGGGAACGGATTCAAA 1484
|||||||||||||||||||||||.|||||||||||||||||.||.||.||
BL01710___ycg 1438 GTCGGCTACCATCCGTTTGGCGGTTTCAAAATGTCGGGAACCGACTCTAA 1487
BSNT_00569___ 1485 AGCAGGCGGGCCGGATTA-CTTGGCTCTGCATATGCAGGCAAAAACAATC 1533
|||.|||||.||.||||| ||| ||.||.||.||||||||.|||||.|||
BL01710___ycg 1488 AGCGGGCGGACCTGATTATCTT-GCGCTTCACATGCAGGCGAAAACGATC 1536
BSNT_00569___ 1534 AGTGAAATGTTCTAA 1548
||.||||||||.|||
BL01710___ycg 1537 AGCGAAATGTTTTAA 1551
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