Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00603 and BL01714
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:13
# Commandline: needle
# -asequence dna-align/BSNT_00603.1.5803.seq
# -bsequence dna-align/BL01714.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00603-BL01714.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00603-BL01714.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00603
# 2: BL01714
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 463
# Identity: 283/463 (61.1%)
# Similarity: 283/463 (61.1%)
# Gaps: 80/463 (17.3%)
# Score: 693.0
#
#
#=======================================
BSNT_00603 1 ------ATGGAA------ATGGATTTAATCTCTAAACTTAATCAGCAGTG 38
|.|||| ||.||..|.| |.||||||.|.||
BL01714 1 GTGAATACGGAACAAACCATAGAAGTGA---------TGAATCAGAACTG 41
BSNT_00603 39 GACAGATATTTATT---ATTTATTACATTATCAACATAAAGAT-AATATT 84
|||.||||||||.| ||.| ..||||.| |||||.|.||| ||| |.
BL01714 42 GACGGATATTTACTACCATCT-GCACATGA--AACATGATGATCAAT-TG 87
BSNT_00603 85 TCTCACCAGGCAATACGGATTATGCAGCATATTGAAAAGCAAGGTGAGGT 134
||||||||.||..|.|||||..|.||||||||.|||||..|..|....||
BL01714 88 TCTCACCAAGCGGTTCGGATGCTTCAGCATATCGAAAAAAACCGCTTTGT 137
BSNT_00603 135 GACAATAGGAGCTTTGGCTGAATACTTGTCTGTCTCTCACAATACAGCGT 184
|||.||.||...|||.||...||..|||..|||||||||.|||||.||.|
BL01714 138 GACCATTGGCCATTTAGCAAGATTGTTGGATGTCTCTCATAATACGGCAT 187
BSNT_00603 185 CAGAGCATACTAAACGTTTGATTC-AAAAGGGATT-TATAGCTAAACGGC 232
||||.|||...|||.|..|.||.| |||||||.|| ||.||..||||.|.
BL01714 188 CAGAACATGTGAAAAGACTAATACAAAAAGGGCTTGTACAGAAAAACAGG 237
BSNT_00603 233 GAAGTCAACAG-GATGAACGAAAAGTTTTAGTTTTCTTAACACAAGAAG- 280
|| ||.||| ||||||||.|||||.|..||....|||||.|..||||
BL01714 238 GA---CAGCAGCGATGAACGCAAAGTCTACGTCACGTTAACGCCTGAAGG 284
BSNT_00603 281 -GAAG-ATCTGTTCTTG-AACAGCATACACAG-CTAGAT---AAAGAGAA 323
|||| |.|.| || |||.|||||| .|| ||..|| ||| ||
BL01714 285 TGAAGAAGCAG----TGAAACGGCATAC-GAGACTTAATCCGAAA---AA 326
BSNT_00603 324 ATT--AAAAG----------AAATAATTGAACGAATGAGCACATCAGAAA 361
|.| ||||| ||.|||.|| |.|||..|| || ||||
BL01714 327 ACTGCAAAAGGTGCTGGAGCAATTAAATG-AGGAAGAAG----TC-GAAA 370
BSNT_00603 362 AGCAATTACTTGAACAGGCATTTGAACTT-TTAAGTAGGGAAGCTAAACA 410
.| .||| .|||| |||||| ..||| |||||..||||.||.|||..
BL01714 371 TG--GTTA---AAACA-GCATTT-TCCTTGTTAAGCCGGGAGGCAAAATC 413
BSNT_00603 411 ATGGCAGTTTTAA 423
||| .||||||
BL01714 414 ATG---TTTTTAA 423
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