Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00662 and BL01753

See Amino acid alignment / Visit BSNT_00662 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:17
# Commandline: needle
#    -asequence dna-align/BSNT_00662___gerKB.1.5803.seq
#    -bsequence dna-align/BL01753___gerKB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00662___gerKB-BL01753___gerKB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00662___gerKB-BL01753___gerKB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00662___gerKB
# 2: BL01753___gerKB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1228
# Identity:     723/1228 (58.9%)
# Similarity:   723/1228 (58.9%)
# Gaps:         227/1228 (18.5%)
# Score: 1795.0
# 
#
#=======================================

BSNT_00662___      1 ATGGAAAAAGCCAGAATAA-----GCATAAGGCAGCTGTTTGTCATGATT     45
                     |||||.|||||.|.|||.|     |||     ||||||||.||..|.|||
BL01753___ger      1 ATGGAGAAAGCAAAAATCAGTGCTGCA-----CAGCTGTTCGTGCTTATT     45

BSNT_00662___     46 ATCATTTTTGAACTGGGCAGCTCCTTATTGATTACACCGGGATCAA--TG     93
                     .|..|.||||||||..|||||||..|..|||||...||.||| |||  ||
BL01753___ger     46 GTTCTGTTTGAACTCAGCAGCTCTCTGCTGATTTTTCCAGGA-CAATCTG     94

BSNT_00662___     94 GCGGGCAGGGATGCTTGGATAGCAGTTTTATTAGG--CTGTGCGATCGGA    141
                     .||..|| |||.||.|||||.||..|.||.||.||  |.||..||  ||.
BL01753___ger     95 CCGAACA-GGACGCCTGGATCGCGATCTTGTTCGGAACAGTCGGA--GGG    141

BSNT_00662___    142 CTG--TTTCTTTTCTGTTTGTATCAAGGCATTTATCAA-----TGTTATC    184
                     |||  ||| .|||.|| .||.||||    .|||.||.|     || .|||
BL01753___ger    142 CTGGCTTT-GTTTATG-ATGCATCA----CTTTTTCTACCAGGTG-AATC    184

BSNT_00662___    185 CGAATTCTTCTCCGAAAGAATATATG--GATG-ATATGCTGGGAACCAAG    231
                     |..|..|.|||||..|.|||   |.|  |||| ||||..|.||||  ||.
BL01753___ger    185 CCGACGCCTCTCCCTATGAA---ACGCTGATGAATATTTTTGGAA--AAC    229

BSNT_00662___    232 CTGAGCTGGCTG----TTTTCATTTCTCTATA--------TATTGTACTT    269
                     |  .|.||||||    .|..|||||.||||.|        ||||||    
BL01753___ger    230 C--GGTTGGCTGGAGCATGACATTTATCTACATTGTTTATTATTGT----    273

BSNT_00662___    270 TGCCTATAATGCCGCAAGGGTGCTGCGTGACTTTGGAGAAATGCTGCTGA    319
                         ||.|.|||.||||||||..||||.||.|||||||||||||||||||
BL01753___ger    274 ----TACATTGCGGCAAGGGTTTTGCGCGATTTTGGAGAAATGCTGCTGA    319

BSNT_00662___    320 CGTTTGCTTATCATGATACACCTATCATTATTGTAAATGCTTTATTAATG    369
                     |.|..|||||||...|.||.||.||.||..|.|..||||..||.||.||.
BL01753___ger    320 CATCGGCTTATCCGAACACGCCGATTATCTTCGCTAATGGATTGTTGATT    369

BSNT_00662___    370 GTAGTAAGCATATATGCCGTAAGAAAAGGAATTGAAGTACTCGCACGCGC    419
                     |.|||..|.||.|.|.|.||.||.||.|||||.||.||.||.||.||..|
BL01753___ger    370 GCAGTTTGTATTTTTACTGTGAGGAAGGGAATCGAGGTCCTTGCCCGTTC    419

BSNT_00662___    420 TGCCGAACTTCTTTTCGGGGTCATGTATTTACTGGGC--GCGATC---GG    464
                     .|.|||.||..|.||.||..||||||.||     |||  ||..||   ||
BL01753___ger    420 AGGCGAGCTGTTGTTTGGCATCATGTTTT-----GGCTTGCTGTCACAGG    464

BSNT_00662___    465 GCTCGTGCTGATTATTGTC-TCAGGCACTATAGACCCGCACAA---TTTA    510
                     .||..|.|||| ||.|.|| ||||||...||..|.|||.|..|   ||| 
BL01753___ger    465 CCTAATCCTGA-TAGTTTCGTCAGGCTTGATCAAACCGAAAGAGCTTTT-    512

BSNT_00662___    511 AAGCCGGTT-TTGGCAAACGGTATTTC----TCCTATCCTTCACTCTGTT    555
                       |||..|| |||| ||||||    .|    |||.||..||||..|.||.
BL01753___ger    513 --GCCCATTCTTGG-AAACGG----ACCCGGTCCGATGTTTCATGCCGTG    555

BSNT_00662___    556 TTCACGCAGACCATGTACGTCCCATTTGGTGAAGTCGTTTTATTTGTGAT    605
                     ||||||||.||..||||..|.||.|||||.|||               ||
BL01753___ger    556 TTCACGCAAACGCTGTATTTTCCGTTTGGAGAA---------------AT    590

BSNT_00662___    606 GAT----TTTCCCT--ATCCTG-----AATAACAGAAAAGATGTAA----    640
                     .||    |||.|.|  ||||||     ..|||..|||||||   ||    
BL01753___ger    591 TATCGCCTTTACATTGATCCTGCCGTATTTAAAGGAAAAGA---AACTAG    637

BSNT_00662___    641 --AAAAAA---------TGGGGATGATTGCCATGGCTATTAGCGGATTGG    679
                       ||||||         |.||||  ||||||      ||.|||||     
BL01753___ger    638 CGAAAAAAGCCGGGTTGTTGGGA--ATTGCC------ATCAGCGG-----    674

BSNT_00662___    680 TTGTGGCGCTCACCGTGGCGATTAAT------------ATCAGCGTGCTT    717
                            .||||.|.||||..|||||            ||||||||||||
BL01753___ger    675 -------CCTCATCCTGGCTTTTAATGTCGCATTGAACATCAGCGTGCTT    717

BSNT_00662___    718 GATGTTGATCTTACACTCAGATCCCAGTTCCCGCTT-------TTAAGTA    760
                     |..||.|||||.|     |.||.|  |.||.|||||       .|.||||
BL01753___ger    718 GGCGTCGATCTCA-----ATATGC--GGTCGCGCTTCCCATTGCTGAGTA    760

BSNT_00662___    761 CGATCCAGAC-AATCAAGGTCGAAGAATTTTTAGACCGGCTCGATGTCTT    809
                     |||||||||| |.|||| ||||..|||||.||.|||.||||.|||||.||
BL01753___ger    761 CGATCCAGACGATTCAA-GTCGCCGAATTCTTGGACAGGCTTGATGTATT    809

BSNT_00662___    810 TTTTATGCTGGCGCTGATCATCGGCGGCTTCTTTAAGGTTAGCCTCTACT    859
                     |||.|||||.|.||||.|.||.|||||.||.||||||.|.|||.|.|.|.
BL01753___ger    810 TTTCATGCTCGTGCTGGTGATTGGCGGTTTTTTTAAGATGAGCATTTTCA    859

BSNT_00662___    860 TATATGCC---ACTGTGGTTGGGACATCTACG--CTCTTTAAGGAAAAGA    904
                     |.||||||   ||.|..|..|.|||     ||  .|.||.|||...||.|
BL01753___ger    860 TGTATGCCGTAACCGAAGGCGTGAC-----CGTTTTATTCAAGCTTAAAA    904

BSNT_00662___    905 ATCTCTCTCAATTGGCTTATCCGATGGG----ATTGGGCATCTTAATCCT    950
                     |.|.|||..||.|.|.|.||...||.||    |||    ||.||.||..|
BL01753___ger    905 ACCCCTCCAAAGTTGTTCATGTCATCGGCATTATT----ATTTTGATTTT    950

BSNT_00662___    951 TTCTTTAACGATCGCAACTAACTTTTCAGAGCACTTGAACGAAGGCTTGA   1000
                     .||..|..|.||.||.|..||..||||||||||..|.||.||||    ||
BL01753___ger    951 GTCCGTCTCCATTGCCAGCAATATTTCAGAGCATGTTAAAGAAG----GA    996

BSNT_00662___   1001 A-CG---TGGTGCCGCTGTATATTCATTTGCCTTTTCA-ATTATTGTTTC   1045
                     | ||   |.||.||..|.|||.|.||||||||..|.|| .|.||..||.|
BL01753___ger    997 ATCGAGTTTGTTCCATTATATGTCCATTTGCCGATGCAGGTGATCCTTCC   1046

BSNT_00662___   1046 CGCTCTTTCTGTTTATTGTGGCTGTTTG-GAAAAAGAAACGAAGAGAGAA   1094
                     |||| |||.|.|..||.||..|| |.|| |||||.|||   ||.|.|.||
BL01753___ger   1047 CGCT-TTTATTTGCATAGTCACT-TATGTGAAAATGAA---AAAAAATAA   1091

BSNT_00662___   1095 GTCAAAAGGGACAGGAATAAAGGAATGA   1122
                       .||||.||.||.|  |||        
BL01753___ger   1092 --AAAAAAGGCCATG--TAA--------   1107


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