Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00580 and BL01770

See Amino acid alignment / Visit BSNT_00580 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:12
# Commandline: needle
#    -asequence dna-align/BSNT_00580___nasE.1.5803.seq
#    -bsequence dna-align/BL01770___nasE.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00580___nasE-BL01770___nasE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00580___nasE-BL01770___nasE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00580___nasE
# 2: BL01770___nasE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 326
# Identity:     246/326 (75.5%)
# Similarity:   246/326 (75.5%)
# Gaps:          10/326 ( 3.1%)
# Score: 869.0
# 
#
#=======================================

BSNT_00580___      1 ATGGTAAACAAAGACGTAACAAA--AGTATGTATCGGAAAAATTGAAGAA     48
                     |||||.|||||..||.|||||||  .||.|||.|||  ||.||.|..||.
BL01770___nas      1 ATGGTGAACAAGAACTTAACAAAGGTGTTTGTTTCG--AAGATCGGGGAT     48

BSNT_00580___     49 TTGCCTGAA-CAATTAGGCAAAACAGTGTATATTGAAGATAAGGAGCTCG     97
                     ||||| ||| ||..|.||.||.|||||||..||..|.||.|||||..|||
BL01770___nas     49 TTGCC-GAATCAGCTTGGGAAGACAGTGTTCATCAAGGACAAGGAAATCG     97

BSNT_00580___     98 CGGTTTTCAAGCTTTCAGACGGAAGCATCCGCGCCATCGAAAACCGCTGT    147
                     ||||.||||||||||||.||||.|||.|||||||.||.|||||||||||.
BL01770___nas     98 CGGTATTCAAGCTTTCAAACGGCAGCGTCCGCGCGATTGAAAACCGCTGC    147

BSNT_00580___    148 CCGCATAAGGGCGGCGTCCTGGCAGAAGGCATCGTCAGCGGTGAATATGT    197
                     ||.||.||.||.|||||.||.||.|||||.||.||.|||||.||||..||
BL01770___nas    148 CCCCACAAAGGGGGCGTGCTTGCCGAAGGAATGGTAAGCGGCGAATTCGT    197

BSNT_00580___    198 TTTCTGCCCGATGCACGACTGGAAAAT-TTCCTTAGAAGACGGAATCGTC    246
                     .|||||.|||||||||||||||||.|| ..|||| ||||||||.|..|||
BL01770___nas    198 CTTCTGTCCGATGCACGACTGGAAGATCAGCCTT-GAAGACGGCAAAGTC    246

BSNT_00580___    247 CAAGAACCTGACCAC-GGATGTGTCAAAACATATGAAACGCTGATCGAAG    295
                     |||||.||||| ||| ||.|||||..|.|||||.||||||.|..|.||||
BL01770___nas    247 CAAGAGCCTGA-CACGGGGTGTGTGCAGACATACGAAACGGTCGTTGAAG    295

BSNT_00580___    296 GAGAACATGTTTATCTCGTATATTGA    321
                     |.|||.||.|.|||.||||.||||.|
BL01770___nas    296 GCGAAGATTTGTATATCGTTTATTAA    321


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