Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00459 and BL01779

See Amino acid alignment / Visit BSNT_00459 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:06
# Commandline: needle
#    -asequence dna-align/BSNT_00459___ycbP.1.5803.seq
#    -bsequence dna-align/BL01779___ycbP.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00459___ycbP-BL01779___ycbP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00459___ycbP-BL01779___ycbP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00459___ycbP
# 2: BL01779___ycbP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 406
# Identity:     265/406 (65.3%)
# Similarity:   265/406 (65.3%)
# Gaps:          44/406 (10.8%)
# Score: 820.0
# 
#
#=======================================

BSNT_00459___      1 ATGACACATGTGAAAGCGCTCGCTATTAAAGGTATTATGACGATTATTGT     50
                     |||..||||||||||||.||.||.||.|||||.||.|||||||||.|..|
BL01779___ycb      1 ATGGAACATGTGAAAGCCCTTGCCATCAAAGGCATCATGACGATTGTGAT     50

BSNT_00459___     51 GTTGTATCTGGTGCTTGGTCTGGGCTTTGGTTTCACGTTTGGTGATACGC    100
                     ..||||.||.||.||.||.||.||.|||.||||.|..||||...|.||.|
BL01779___ycb     51 TCTGTACCTTGTTCTAGGGCTCGGGTTTAGTTTTAGTTTTGAAAACACCC    100

BSNT_00459___    101 TGCTAATGACGATTGTGTTAGGGGTTATTTCTTATTTGCTGGGCGATCTT    150
                     |..|.||.||||||||..|.||.|...|.||.|||||||||||.||  ||
BL01779___ycb    101 TATTCATCACGATTGTTCTTGGCGCAGTATCCTATTTGCTGGGTGA--TT    148

BSNT_00459___    151 TATGTAT--TGCCGAGATGGAATAATATGATTGCAACTTTGGCTGATTTT    198
                     |.|.|||  ||||||.|...||.||.||.|..||.|||||.||.|||||.
BL01779___ycb    149 TGTTTATTCTGCCGAAAACCAACAACATCACGGCCACTTTAGCCGATTTA    198

BSNT_00459___    199 GGCTTGGCCTTTCTTGTGATCTGGCTGATGGGCATGCCGCTTTCCCTGGG    248
                     |||.|.||.||||||||..|.||||||||||      |.|||.|..||||
BL01779___ycb    199 GGCGTCGCTTTTCTTGTCGTTTGGCTGATGG------CTCTTGCGATGGG    242

BSNT_00459___    249 GATGACTGGCGGTGAA----GTTGCGTTGGCGGCTTTATTCGGCGCAATC    294
                     .|.|.|||.|    ||    |.|||.|||||.||.||.||.|..||..||
BL01779___ycb    243 AACGGCTGCC----AACACCGCTGCATTGGCCGCGTTTTTTGCAGCTGTC    288

BSNT_00459___    295 GTCATGGCAATCGGTGAAT--ATTGCTTCCATTTCTATATGATGAGCAAA    342
                     |..|||||.||||||||||  |||  ||||||||.||..||||||..|||
BL01779___ycb    289 GCTATGGCGATCGGTGAATACATT--TTCCATTTTTACTTGATGAATAAA    336

BSNT_00459___    343 GAGATTGGC-----------AAGAAGCATTATCTTGAAACAAGAACAGAC    381
                     |...|||||           .||||        |.|||||.|||||.|| 
BL01779___ycb    337 GGCCTTGGCTCGCCCAACCGCAGAA--------TGGAAACGAGAACGGA-    377

BSNT_00459___    382 TCATAA    387
                       ||||
BL01779___ycb    378 --ATAA    381


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