Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00431 and BL01786

See Amino acid alignment / Visit BSNT_00431 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:04
# Commandline: needle
#    -asequence dna-align/BSNT_00431___ybgJ.1.5803.seq
#    -bsequence dna-align/BL01786___glsA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00431___ybgJ-BL01786___glsA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00431___ybgJ-BL01786___glsA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00431___ybgJ
# 2: BL01786___glsA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1014
# Identity:     742/1014 (73.2%)
# Similarity:   742/1014 (73.2%)
# Gaps:          60/1014 ( 5.9%)
# Score: 2613.5
# 
#
#=======================================

BSNT_00431___      1 ATGA---AAGAATTGATAAAAGAGCACCAGAAAGACATAAACCC------     41
                     ||||   |||.||||      ||     ||||.|..||.|..||      
BL01786___gls      1 ATGAATGAAGTATTG------GA-----AGAACGCTATGACGCCCGCTTC     39

BSNT_00431___     42 -GGCGTTACAG-CTTCATGATTGGGTTGAATACTATCGCCCTTTTGCCGC     89
                      |||..|.|.| |||.|.||||.|||.|||.|.||.||.||||||.||.|
BL01786___gls     40 TGGCAATCCCGCCTTGAAGATTTGGTCGAACATTACCGTCCTTTTTCCTC     89

BSNT_00431___     90 CAATGGACAAAGCGCAAACTATATCCCCGCTTTAGGAAAAGTCAATGATT    139
                     .|..||||..|.|||..|.||.||.|||||||||||||||.||   ||.|
BL01786___gls     90 AAGCGGACGCAACGCCGAATACATTCCCGCTTTAGGAAAAATC---GACT    136

BSNT_00431___    140 C---ACAGCTCGGCATCTGTGT-ATTGGAGC-CTGATGGAACGATGATAC    184
                     |   .||||||||||||||||| ||.|  || |||||..|||||||||..
BL01786___gls    137 CTAACCAGCTCGGCATCTGTGTGATCG--GCTCTGATCAAACGATGATCA    184

BSNT_00431___    185 ACGCCGGCGACTGGAACGTCTCTTTTACCCTGCAAAGCATTTCAAAAGTG    234
                     |.||.||..|.|.|.||||.||.||.||.||.||.|||||.||.||.|||
BL01786___gls    185 AAGCAGGAAATTCGGACGTATCATTCACACTCCAGAGCATCTCGAAGGTG    234

BSNT_00431___    235 ATTAGCTTTATTGCCGCCTGCATGAGCCG--CGGCATTCCCTATGTGCTG    282
                     ||.||||||||.||.||.||..|||  ||  .||.|||.|.||.||..|.
BL01786___gls    235 ATCAGCTTTATCGCAGCGTGTTTGA--CGAAAGGGATTTCTTACGTATTA    282

BSNT_00431___    283 GACCGCGTAGATGTCGAGCCGACAGGCGACGCCTTTAATTCAATCATCCG    332
                     |||||.||.|||||.||.|||||.||.|||||.||.||||||||||||||
BL01786___gls    283 GACCGTGTTGATGTAGAACCGACGGGAGACGCGTTCAATTCAATCATCCG    332

BSNT_00431___    333 GCTCGAAATCAACAAGCCGGGGAAGCCCTTCAATCCCATGATCAACGCGG    382
                     .||.|||||..||||||||||.|||||.||.||.||.|||||||||||.|
BL01786___gls    333 CCTTGAAATGCACAAGCCGGGAAAGCCGTTTAACCCGATGATCAACGCCG    382

BSNT_00431___    383 GCGCCCTCACCATCGCTTCGATTCTTCCCGGAGAATCGGCA-TACGAAAA    431
                     |.||.||.|||.|..|.|||||.||||||||.||||||||| |..|||||
BL01786___gls    383 GAGCGCTGACCGTTTCGTCGATCCTTCCCGGTGAATCGGCACTGGGAAAA    432

BSNT_00431___    432 GCTCGAGT---TTCTTTACTCGGTGATGGAAACTTTGATAGGAAAACGGC    478
                      .|.||||   |||.|.||   ||.||.||||...||||.||||||||||
BL01786___gls    433 -ATAGAGTCGCTTCATGAC---GTCATTGAAAAAATGATTGGAAAACGGC    478

BSNT_00431___    479 -CGAGAATTC-ATGAGGAAGTATTCCGTTCTGAATGGGAAACCGCCCACC    526
                      .||||  || ||||||||||.||.||.||.||.|||.|.||||||||.|
BL01786___gls    479 TTGAGA--TCAATGAGGAAGTCTTTCGGTCAGAGTGGCAGACCGCCCATC    526

BSNT_00431___    527 GCAACAGAGCGCTGGCCTACTATTTAAAAGAAACAAACTTTTTAGAAGCT    576
                     |.||||||||..|||||.|.||||||||.|||||...|||..|.|||||.
BL01786___gls    527 GGAACAGAGCATTGGCCCATTATTTAAAGGAAACCGGCTTCCTCGAAGCA    576

BSNT_00431___    577 GAAGTAGAAGAAACACTTGAGGTGTACTTGAAGCAATGCGCTATGGAGAG    626
                     ||.||.||||||||.|||||.||.||..||||.||||||.|||||||..|
BL01786___gls    577 GACGTTGAAGAAACGCTTGAAGTCTATCTGAAACAATGCTCTATGGAAGG    626

BSNT_00431___    627 CACCACAGAAGATATTGCGTTGATCGGCCTGATCCTTGCTCATGACGGGT    676
                     .|.|||.|||||.||.||.|||||||||.||||.|||||..|||||||.|
BL01786___gls    627 AAGCACTGAAGACATCGCCTTGATCGGCATGATTCTTGCAAATGACGGAT    676

BSNT_00431___    677 ATCATCCGATTCGACGCGAGCAGGTGATTCCAAAAGATGT-----GGCAA    721
                     |.|||||..|.||.||.||.||.||.|||||.||.|||||     |||  
BL01786___gls    677 ACCATCCTTTCCGCCGTGAACATGTCATTCCGAAGGATGTCGCGCGGC--    724

BSNT_00431___    722 AATTGGCCAAGGCGTTAATGCTGACGTGCGGCATGTACAACGCTTCAGGC    771
                        ||.|.||.||.|||||||||||||||||.|||||.||.||.|||||.
BL01786___gls    725 ---TGACAAAAGCTTTAATGCTGACGTGCGGAATGTATAATGCATCAGGA    771

BSNT_00431___    772 AAATATGCGGCGTTTGTCGGCGTGCCGGCCAAAAGCGGCGTCTCCGGCGG    821
                     ||||..|||||.|||||||||.|.|||||.||||||||||||||||||||
BL01786___gls    772 AAATTCGCGGCCTTTGTCGGCATTCCGGCAAAAAGCGGCGTCTCCGGCGG    821

BSNT_00431___    822 CATCATG-GCGCTGGTGCCTCCAAGCGCCAGAAGAGAACAGCCTTTTCAA    870
                     .|||||| |||| ||||||..|.||||..|.||||||||||||||||||.
BL01786___gls    822 AATCATGTGCGC-GGTGCCCGCCAGCGTGAAAAGAGAACAGCCTTTTCAG    870

BSNT_00431___    871 TCCGGATGCGGCATCGGCATTTACGGGCCTGCCATTGATGAATACGGTAA    920
                     ..||||||||||||||||||.||.||.||.||.|||||.||.|||||.||
BL01786___gls    871 CACGGATGCGGCATCGGCATCTATGGTCCGGCGATTGACGATTACGGAAA    920

BSNT_00431___    921 CAGCCTCACTGGCGGTATGCTGCTGAAGCATATGGCGCAGGAGTGGGAGC    970
                     ||||.|.||.|||||.|||||..|.||.|||||.||.|..||.|||||.|
BL01786___gls    921 CAGCATGACGGGCGGAATGCTTTTAAAACATATAGCCCGTGAATGGGATC    970

BSNT_00431___    971 TCAGCATTTTTTAA    984
                     ||||.|||||||||
BL01786___gls    971 TCAGTATTTTTTAA    984


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