Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05126 and BL01795
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:14
# Commandline: needle
# -asequence dna-align/BSNT_05126___yvbK.1.5803.seq
# -bsequence dna-align/BL01795___yvbK.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05126___yvbK-BL01795___yvbK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05126___yvbK-BL01795___yvbK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05126___yvbK
# 2: BL01795___yvbK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 497
# Identity: 304/497 (61.2%)
# Similarity: 304/497 (61.2%)
# Gaps: 79/497 (15.9%)
# Score: 819.0
#
#
#=======================================
BSNT_05126___ 1 ATGCAACACCTCACCATTC--AAAAAGC------AACAAACTTTGATCAA 42
||| |.||||| |.|..|| |||| |||.|..
BL01795___yvb 1 ATG---------AACATTCGGAGATTGCATCCAGAACA-----TGAGCCG 36
BSNT_05126___ 43 CCGCTGTATGAGCTTCTGCTGCTCGCCGATCCGTCAAAAGAAATTGTTGA 92
||||| |||..|.|||.||...||.||.||.||..||.||.|.|||.|
BL01795___yvb 37 CCGCT---TGATTTGCTGTTGACGGCAGACCCTTCCGAAAAACTGGTTAA 83
BSNT_05126___ 93 TGACTACTTGGTCAGAGGAGAATGCTACACAG--GTTATATATCAGGCGA 140
.||.|||.|.|...|.|||.|.|||||.|||| |..||..| |.|.||.
BL01795___yvb 84 CGATTACCTCGAACGGGGACAGTGCTATACAGCCGAAATCGA-CCGCCGG 132
BSNT_05126___ 141 ATTAGCTGGTGTATACGTGATCATCACAACTAGGCCACAAACGGTAGAAA 190
||| ||.|||||.||.|||.|..|..|.||.|||||..||||||.|||..
BL01795___yvb 133 ATT-GCCGGTGTCTATGTGCTGCTGCCGACGAGGCCTGAAACGGCAGAGC 181
BSNT_05126___ 191 TCGTTAACATCGCAGTAAAACAAACAA----TGCA---AAAACAGGGCAT 233
||||.||.|||||.|| ||||.|| |||| |||| ||.||
BL01795___yvb 182 TCGTCAATATCGCCGT----CAAAGAAGATCTGCAGGGAAAA---GGAAT 224
BSNT_05126___ 234 TGGCA---AGCTTCTTATCCTCGACGCCATTGAAAAAGCGAAA-CACATG 279
.|||| |..|..||||.| |.||.|||||||.||||||| |.|| .
BL01795___yvb 225 CGGCAGACAATTGGTTATGC---ATGCGATTGAAACAGCGAAAGCTCA-A 270
BSNT_05126___ 280 GGAGCAAAGGTGATTGAAATAGGTACTGGAAATTCAAGCATCCATCAATT 329
|||...|||..|||||||||.||.||.||.||||||||||||..|||..|
BL01795___yvb 271 GGATTTAAGACGATTGAAATCGGAACCGGGAATTCAAGCATCGGTCAGCT 320
BSNT_05126___ 330 GTCTCTATATCAAAAATGCGGATTTCGCCTTCAA------GCGATCGACC 373
|.|.||.||||||||||||||||||.| || || |||||||
BL01795___yvb 321 GGCGCTCTATCAAAAATGCGGATTTAG-----AATCACCGGC-ATCGACC 364
BSNT_05126___ 374 ATGATTTTTTTATCAGACACTACGACGAGGAGATTTTTGAAAACGGCATT 423
...|.|||||..|.|||||.|||||..||..|||.|..|||||||||||.
BL01795___yvb 365 GGAACTTTTTCCTGAGACATTACGAGAAGCCGATATACGAAAACGGCATG 414
BSNT_05126___ 424 CAATGCCGTGATATGGTGAGGCTTTATTTGGATCTCT-GA------- 462
|..|||...||||||.| ..|||| |||.|| ||
BL01795___yvb 415 CGCTGCATCGATATGAT-CCGCTT-------ATCGCTCGACCTGTAA 453
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