Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00510 and BL01806
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:08
# Commandline: needle
# -asequence dna-align/BSNT_00510.1.5803.seq
# -bsequence dna-align/BL01806___yceB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00510-BL01806___yceB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00510-BL01806___yceB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00510
# 2: BL01806___yceB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1023
# Identity: 341/1023 (33.3%)
# Similarity: 341/1023 (33.3%)
# Gaps: 564/1023 (55.1%)
# Score: 973.0
#
#
#=======================================
BSNT_00510 0 -------------------------------------------------- 0
BL01806___yce 1 ATGCAGCTCAGCATTCTTGACCAGGTTCCTATATCAAAAGGCTCGGATGC 50
BSNT_00510 0 -------------------------------------------------- 0
BL01806___yce 51 GCATTCAGCTCTAAAGCATTCTGCAGAGCTGGCGGAACTTGCGGATCAAT 100
BSNT_00510 0 -------------------------------------------------- 0
BL01806___yce 101 GGGGGTACAAAAGGTATTGGTTTGCCGAGCATCACAGCACACGGGGGCTT 150
BSNT_00510 0 -------------------------------------------------- 0
BL01806___yce 151 GCCAGCACCGCTCCAGAAATCATGATCGCACACATTGCGGCAAAGACGGC 200
BSNT_00510 0 -------------------------------------------------- 0
BL01806___yce 201 GAATATTCGCGTCGGTTCGGGCGGCGTTCTGCTGCCCCAATACAGTCCCT 250
BSNT_00510 0 -------------------------------------------------- 0
BL01806___yce 251 TTAAAGTGGCTGAAAACTTTCGGCAGCTTGAAGCCCTTTATCCCGGGAGA 300
BSNT_00510 0 -------------------------------------------------- 0
BL01806___yce 301 ATTGACCTGGGGATCGGCCGCTCTCCGGGAGGCACAACTAAAACGAGGCT 350
BSNT_00510 0 -------------------------------------------------- 0
BL01806___yce 351 GGCGCTGACAGACGGGGTTCATAAAAGCCTGCACGAATTCCCGAGACAGT 400
BSNT_00510 0 -------------------------------------------------- 0
BL01806___yce 401 TACAAGACTTGGTTAGCTTTCTGACTGATTCCGTGCCTTCCGGACATGAT 450
BSNT_00510 1 -----------------------------------------------GTG 3
|||
BL01806___yce 451 TACTTCGGAATTAAAGCCTCCCCTTTGACGGATTCGCCCCCGGAGGTGTG 500
BSNT_00510 4 ----CTCGGTCTTGGTGAAAACAGCGCAAGACGCGCGGCGCACCAGGGGA 49
.|.||.||.||.|||||||||||||.|...||.| |.|.||.||||
BL01806___yce 501 GCTTTTAGGCCTGGGAGAAAACAGCGCAAAATTGGCCG-GTAGCATGGGA 549
BSNT_00510 50 -TTGGATATGTGTTTGGGCATTTCATTAATCCCGAGCGAGGAGAAAATGC 98
..|||||.||.||.||.||||||||...|||||.|.|||||.|.||.||
BL01806___yce 550 GCGGGATACGTATTCGGCCATTTCATCTCTCCCGCGAGAGGAAAGAACGC 599
BSNT_00510 99 ATTCCGCATC-TACCGGGAAAGCTTTCGGCCCTCAGCCCATT-TTTCGAA 146
.||.| .||| |||||.||||||||||||||.|| |||.|| ||| |
BL01806___yce 600 CTTTC-AATCATACCGTGAAAGCTTTCGGCCTTC--CCCTTTCTTT---A 643
BSNT_00510 147 ACCGTCCGCACTGTTT-----ACGATTTTTGTCATTTGCGCAAAAACAGA 191
|.||.||.||.|..|| .|| ||||.|||.||||.||..|..|.||
BL01806___yce 644 AACGCCCCCAATCATTGGCCGCCG-TTTTCGTCGTTTGTGCGGAGTCCGA 692
BSNT_00510 192 TGAAGAGGCAGAAGAACTC-GCATTAAGCCAGGATTTGTGGCTTCTTCGC 240
||||.|.||.||.||.||| || ||.|||||.|||||.||||||||.||.
BL01806___yce 693 TGAAAAAGCCGAGGAGCTCTGC-TTGAGCCAAGATTTATGGCTTCTCCGG 741
BSNT_00510 241 GTCGGGAAAGGCTTGGACAGCCGCGTGCCAAGCATCGAGGAAGCCAAA-- 288
||.|..|||||..|||||||||..||.||||||||.||.||.||.|||
BL01806___yce 742 GTTGAAAAAGGGCTGGACAGCCTTGTCCCAAGCATTGAAGAGGCGAAATC 791
BSNT_00510 289 -GCCCATCCCTACACAGCGTCCGATAAAAAACTCATAGAAG-------AA 330
||| .|.||||||||..||||||||| ||||| ||
BL01806___yce 792 GGCC---GCTTACACAGCTGCCGATAAAA-------AGAAGCTTGCCCAA 831
BSNT_00510 331 AACAGAAAGCGGATGGTGATCGGTTCTC--CAACCACTGTCAAACAG-CA 377
|||.|.|..||.|||||||||||.|||| ||| ||.|||||| || .|
BL01806___yce 832 AACCGCAGCCGTATGGTGATCGGGTCTCCTCAA--ACAGTCAAA-AGAAA 878
BSNT_00510 378 GCTGTTAGACCTCACAGGCCGCTACGAAACAAATGAAATCATGGTT---- 423
.|||.|.||.||..|.|..||.||..|||||.||||..|.|||.||
BL01806___yce 879 ACTGCTCGAGCTTTCTGAACGATATCAAACAGATGAGTTTATGATTTTAA 928
BSNT_00510 424 CTGTGCAATGTGTTTGATTTTGAAGCGAAAAAAGAA----TCGTATGAGC 469
|| ||.||.|.....||||||| |.||||| ||.||.||..
BL01806___yce 929 CT----AACGTCTACCGGTTTGAAG----ATAAGAAGCAGTCTTACGAAA 970
BSNT_00510 470 GCCTTGCCGGATTGTTTCTATAA 492
|.||.||.|.|||.|||..|
BL01806___yce 971 GACTGGCAGAATTATTTTGA--- 990
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