Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00637 and BL01826

See Amino acid alignment / Visit BSNT_00637 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:16
# Commandline: needle
#    -asequence dna-align/BSNT_00637___yczE.1.5803.seq
#    -bsequence dna-align/BL01826___yczE.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00637___yczE-BL01826___yczE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00637___yczE-BL01826___yczE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00637___yczE
# 2: BL01826___yczE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 688
# Identity:     478/688 (69.5%)
# Similarity:   478/688 (69.5%)
# Gaps:          65/688 ( 9.4%)
# Score: 1604.0
# 
#
#=======================================

BSNT_00637___      1 GTGAAGCAAGAACTTGTTCTGCGCTGGACATTTTATTTTGCCGGTTTGAT     50
                     .||||||..|||||||||.||||||||...||||||||||.|||.|||||
BL01826___ycz      1 TTGAAGCGGGAACTTGTTTTGCGCTGGCTTTTTTATTTTGTCGGATTGAT     50

BSNT_00637___     51 CATTTTGGCTTTTGGTGTATCCCTGACGATAGAAGGAAAAGCACTCGGCA    100
                     ..|||||.||||.||.||.||.||.|||||.|||||.||||..|||||||
BL01826___ycz     51 TGTTTTGTCTTTCGGGGTTTCTCTTACGATTGAAGGGAAAGTGCTCGGCA    100

BSNT_00637___    101 TTAGTCCGTGGGATGCATTTCATTACAGCCTGTTTCAGCACTTCGGGCTT    150
                     |..||||.||||||||.|||||.|||.|.||||.|..||..||.||.|||
BL01826___ycz    101 TCGGTCCTTGGGATGCGTTTCACTACGGGCTGTATATGCTTTTGGGCCTT    150

BSNT_00637___    151 ACCGTCGGCCAGTGGTCCATCATTATTGGAGCGCTCATCGTCGGATTCAC    200
                     ||.||||||||.|||.|.||.|||.|.||.|||.|||||||.||.||.||
BL01826___ycz    151 ACGGTCGGCCAATGGGCGATTATTGTCGGGGCGGTCATCGTAGGTTTAAC    200

BSNT_00637___    201 GTCATTGTTTACGAGAGCTTGGCCGAAAATTGGGGCCCTCCTGAATATGG    250
                     |||.||.|||||.|.|||.|||||||||||.||.|||.|.||.||||||.
BL01826___ycz    201 GTCCTTATTTACAAAAGCATGGCCGAAAATCGGCGCCGTGCTCAATATGC    250

BSNT_00637___    251 TGCTCATTGGTGTATTTATAGATTTTTTCAATTTCATTCTGCCTGCCCCC    300
                     ||.|.||.|||.|.|||||||||||.||.|.||..|||||.||.|.|||.
BL01826___ycz    251 TGTTAATCGGTATTTTTATAGATTTCTTTACTTATATTCTTCCAGACCCG    300

BSNT_00637___    301 TCGACCTACA---CAGGCTC-GATCATCGTCTTC----TCTCTAGGCGTG    342
                     ...||.||.|   ||.||.| |    ||||.|||    ||    |||||.
BL01826___ycz    301 GAAACGTATATTTCAAGCACTG----TCGTATTCGTGATC----GGCGTT    342

BSNT_00637___    343 GTGCTGATTGGTTACGGCGTCGGTGTTTATGTATCAGCAGGCCTTGGCGC    392
                     .|..|.||.||||||||.|||||..||||||||||.||.|..||.||.||
BL01826___ycz    343 ATTTTTATCGGTTACGGAGTCGGCATTTATGTATCGGCCGATCTCGGTGC    392

BSNT_00637___    393 GGGGCCGCGTGATTCACTGATGATGCTGATTACAGAAAAAACCGGCTGGA    442
                     |||.||||||||.||.||||||.|..|||||.|.||.|||||.|||||||
BL01826___ycz    393 GGGTCCGCGTGACTCCCTGATGCTTTTGATTTCCGAGAAAACGGGCTGGA    442

BSNT_00637___    443 ATGTGCAATGGGTGCGGAACGGCATGGAATTAACCATTTTGTTTG--CGG    490
                     |.||.||.|||||.||.|||||.|||||..|.||.||||| .|||  |||
BL01826___ycz    443 ACGTTCAGTGGGTCCGAAACGGAATGGAGCTGACGATTTT-ATTGATCGG    491

BSNT_00637___    491 CATGG-GGCATGGGCGGACCGATCGGTTTTGGCACCATTTTGACCGCCAT    539
                     | ||| .|| |.|||||.||||||||..|.||.||..||||.||||||||
BL01826___ycz    492 C-TGGCTGC-TCGGCGGGCCGATCGGCATCGGTACTGTTTTAACCGCCAT    539

BSNT_00637___    540 CCTCACCGGACTCATTCTGCGTTTTTCATTGCCGCAGTCAATCCAG-TTG    588
                     ..|.|||||.||.|||.||||.|||||.|||||||||||.|..||| || 
BL01826___ycz    540 TTTAACCGGCCTGATTTTGCGGTTTTCTTTGCCGCAGTCCAAACAGCTT-    588

BSNT_00637___    589 CTGAATTATGCTG---TGGC---AAGGCGGA-CAGCCGCTGTGAAAGCAT    631
                      |.||  |.||.|   ||||   ||||||.| ||| .||||..||     
BL01826___ycz    589 -TTAA--AAGCAGCAATGGCAGGAAGGCGCATCAG-AGCTGCCAA-----    629

BSNT_00637___    632 CTCCGCCTGTACA-------CTAA--------------    648
                         |||||||||       ||.|              
BL01826___ycz    630 ----GCCTGTACATATGTCGCTGAAAAAAAACGGATGA    663


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