Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00639 and BL01827
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:16
# Commandline: needle
# -asequence dna-align/BSNT_00639___yckI.1.5803.seq
# -bsequence dna-align/BL01827___yckI.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00639___yckI-BL01827___yckI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00639___yckI-BL01827___yckI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00639___yckI
# 2: BL01827___yckI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 746
# Identity: 604/746 (81.0%)
# Similarity: 604/746 (81.0%)
# Gaps: 4/746 ( 0.5%)
# Score: 2428.0
#
#
#=======================================
BSNT_00639___ 1 ATGCTTACCGTTAAAGGATTAAACAAATCATTCGGTGAAAATGAAATTTT 50
||||||.|..|.|||||..|.||.|||||.|||||.|||||||||||.||
BL01827___yck 1 ATGCTTGCGATCAAAGGGCTGAATAAATCCTTCGGCGAAAATGAAATCTT 50
BSNT_00639___ 51 AAAAAAGATAGATATGAAGATTGAAAAAGGAAAAGTCATCGCCATACTTG 100
||||||.||.|||.||||.||.||||||||||||||.||||||||..|.|
BL01827___yck 51 AAAAAAAATCGATCTGAACATCGAAAAAGGAAAAGTGATCGCCATTTTAG 100
BSNT_00639___ 101 GGCCTTCAGGTTCAGGGAAAACGACGCTGCTCCGCTGCCTGAACGCTCTG 150
|||||||.|||||.||.||||||||||||||.|||||||||||||||.||
BL01827___yck 101 GGCCTTCCGGTTCCGGCAAAACGACGCTGCTTCGCTGCCTGAACGCTTTG 150
BSNT_00639___ 151 GAGATCCCAAATCGCGGAGAGCTTGCATTTGATGATTTCTCCATCGATTT 200
||.||.|||||.|||||....|||.|.|||||.||||||.||||||||||
BL01827___yck 151 GAAATTCCAAACCGCGGCATTCTTTCTTTTGACGATTTCACCATCGATTT 200
BSNT_00639___ 201 CTCCAA-AAAGGTGAAACAGGCGGATATCCTAAAGCTTCGCCGAAAATCC 249
.||||| |||..| ||||..||.||..||||....||.||..||||.||.
BL01827___yck 201 TTCCAAGAAAAAT-AAACCTGCTGACCTCCTCCGCCTGCGGAGAAAGTCG 249
BSNT_00639___ 250 GGAATGGTGTTTCAGGCGTATCACCTGTTCCCGCACCGCACAGCCCTCGA 299
||||||||.||.|||||.|||||||||||||||||||||||.|..|||||
BL01827___yck 250 GGAATGGTATTCCAGGCCTATCACCTGTTCCCGCACCGCACCGTGCTCGA 299
BSNT_00639___ 300 AAACGTGATGGAGGGCCCTGTTCAGGTGCAAAAACGGAACAAAGAGGAAG 349
|||.||||||||.||.|||||..|.||||||||.||.||.|||||.||.|
BL01827___yck 300 AAATGTGATGGAAGGGCCTGTAAAAGTGCAAAAGCGCAATAAAGAAGAGG 349
BSNT_00639___ 350 TCAGAAAAGAAGCGATTCAGCTTCTTGATAAAGTCGG-ATTGAAGGACAA 398
|||.|||.|||||..||||||||||..|.||.||||| .||||| |||||
BL01827___yck 350 TCAAAAAGGAAGCCGTTCAGCTTCTGCAAAAGGTCGGCCTTGAA-GACAA 398
BSNT_00639___ 399 AATGGATTTATATCCATTCCAGCTTTCCGGCGGACAGCAGCAGCGCGTCG 448
|||||||.|.||||||||||||||||||||.|||||||||||||||||||
BL01827___yck 399 AATGGATCTCTATCCATTCCAGCTTTCCGGGGGACAGCAGCAGCGCGTCG 448
BSNT_00639___ 449 GCATCGCCCGCGCACTGGCGATTCAGCCTGAGCTCATGCTGTTTGACGAA 498
|.|||||||||||.|||||.||..||||||||||.|||||.||||||||.
BL01827___yck 449 GGATCGCCCGCGCCCTGGCCATCAAGCCTGAGCTGATGCTTTTTGACGAG 498
BSNT_00639___ 499 CCGACCTCAGCGCTTGATCCCGAGCTTGTCGGAGAGGTGCTGAAGGTTAT 548
||.||.||.||.||.||.||||||||.|||||.||.||||||||.||.||
BL01827___yck 499 CCCACATCGGCTCTGGACCCCGAGCTGGTCGGCGAAGTGCTGAAAGTCAT 548
BSNT_00639___ 549 CAAGGACTTGGCCAATGAAGGCTGGACCATGGTCGTCGTGACCCACGAAA 598
.||.|||.|.||.|||||.||||||||.|||||.|||||.||||||||||
BL01827___yck 549 GAAAGACCTTGCAAATGAGGGCTGGACGATGGTTGTCGTCACCCACGAAA 598
BSNT_00639___ 599 TCAAGTTCGCGCAGGAAGTTGCGGATGAAGTCATCTTCATCGACGGCGGC 648
||||.|||||||||||.||.||.||.||||||.||||.||||||||||||
BL01827___yck 599 TCAAATTCGCGCAGGATGTCGCAGACGAAGTCGTCTTTATCGACGGCGGC 648
BSNT_00639___ 649 GTTATCGTGGAGCAGGGACCGCCGGAGCAAATTTTCTCCGCACCAAAAGA 698
||.|||||.||.|||||.|||||.||.|||||||||||.||.||.||.||
BL01827___yck 649 GTCATCGTCGAACAGGGCCCGCCTGAACAAATTTTCTCAGCCCCTAAGGA 698
BSNT_00639___ 699 AGAGCGGACACAGCGGTTCTTGAACCGGATTTTGAACCCGCTGTAA 744
|||.||.|||.|.|.|||.||.||||||||||||||.||..|.|||
BL01827___yck 699 AGAACGAACAAAACAGTTTTTAAACCGGATTTTGAATCCTGTATAA 744
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