Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00640 and BL01828
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:16
# Commandline: needle
# -asequence dna-align/BSNT_00640___yckJ.1.5803.seq
# -bsequence dna-align/BL01828___yckJ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00640___yckJ-BL01828___yckJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00640___yckJ-BL01828___yckJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00640___yckJ
# 2: BL01828___yckJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 719
# Identity: 545/719 (75.8%)
# Similarity: 545/719 (75.8%)
# Gaps: 28/719 ( 3.9%)
# Score: 2013.0
#
#
#=======================================
BSNT_00640___ 1 ATGTTTCTAAATAATCTGC---CGGCATTGACGCTTGGCACGGCGATCCC 47
||||||||||.||||.|.| |||| |.|..|.|||..|||||||||
BL01828___yck 1 ATGTTTCTAAGTAATATACAAGCGGC---GGCCATCGGCCAGGCGATCCC 47
BSNT_00640___ 48 GTGGGATCTGGTGCAGCAGTCATTCTGGCCGATACTTTCAGGGGGAATCT 97
|||||||||.||||...|||||||.||||||||..|||.|.|||||||||
BL01828___yck 48 GTGGGATCTTGTGCGTGAGTCATTTTGGCCGATCTTTTTAAGGGGAATCT 97
BSNT_00640___ 98 ACTATACGATTCCCCTTACGATTCTTTCCTTTATATTCGGAATGATCCTG 147
|.||..|||||||||||.|.|||||.||.|||||||||||.||||||.|.
BL01828___yck 98 ATTACTCGATTCCCCTTGCCATTCTCTCTTTTATATTCGGTATGATCATC 147
BSNT_00640___ 148 GCGCTGATTACGGCGCTTGCCAGAATGTCGAAAGTGAGACC-----TTTG 192
||..||||.||||||||.||.||||||||.||| .|| |||.
BL01828___yck 148 GCATTGATCACGGCGCTGGCGAGAATGTCCAAA-----TCCCGCATTTTA 192
BSNT_00640___ 193 AGATGGGTGTTCAGCGTATACGTATCCGCAATACGCGGCACTCCTCTTCT 242
|||..|||.|||.||.|.||.||.||.||.||.|||||.||.||.||.||
BL01828___yck 193 AGAGCGGTTTTCGGCATTTATGTCTCAGCGATCCGCGGAACGCCGCTGCT 242
BSNT_00640___ 243 CGTTCAATTGTTCATCATTTTCTATCTGTTCCCGGCCTTTAACGTCACAT 292
||||||..|||||||.|||||.||..||||.||.||.|||.|.|||||..
BL01828___yck 243 CGTTCAGCTGTTCATTATTTTTTACTTGTTTCCAGCGTTTCAAGTCACGA 292
BSNT_00640___ 293 TAGATCCATTTCCAAGCGCAGTTATCGCCTTTTCATTAAACGTCGGCGCC 342
|.||.||.|||||.||||||.|.||.||||||||||||||.||||||||.
BL01828___yck 293 TCGACCCGTTTCCGAGCGCAATCATTGCCTTTTCATTAAATGTCGGCGCT 342
BSNT_00640___ 343 TATGCATCTGAAATCATTCGGGCATCTATTTTATCCGTGCCGAAAGGGCA 392
|||||.||.||||||||..||||.||.||..|.|||||.||||||||.||
BL01828___yck 343 TATGCGTCGGAAATCATCAGGGCTTCCATCCTTTCCGTTCCGAAAGGACA 392
BSNT_00640___ 393 ATGGGAAGCCGGC-TACACAATTGGCATGACACATCAAAAAA---CGCTG 438
.|||| ||.|||| ||..|.|||||.||||| |||||||| ||||
BL01828___yck 393 GTGGG-AGGCGGCTTATTCGATTGGAATGAC---TCAAAAAACGGCGCT- 437
BSNT_00640___ 439 TTCC-GCGTCATTTTGCCGCAGGCGTTTCGTGTGTCGATCCCGCCATTAT 487
|.|| |.|||||..||||||||||..|.||.|||||.||.||||||||||
BL01828___yck 438 TACCAGGGTCATCCTGCCGCAGGCTGTGCGCGTGTCAATTCCGCCATTAT 487
BSNT_00640___ 488 CCAATACCTTTATCAGCCTGATTAAAGATACATCCCTCGCCTCTCAAATT 537
|||||||.||.||||||.||.|||||||||||||.||.||.||.||.|||
BL01828___yck 488 CCAATACATTCATCAGCTTGGTTAAAGATACATCGCTTGCGTCACAGATT 537
BSNT_00640___ 538 CTGGTCGCTGAGCTGTTCAGAAAAGCCCAGGAAATCGGCGCGCGG-AATC 586
||.||.|||||..|.|||.|.||.||||||||||||||.|| ||| ||||
BL01828___yck 538 CTTGTTGCTGAATTATTCCGGAAGGCCCAGGAAATCGGGGC-CGGCAATC 586
BSNT_00640___ 587 TTGATCAAATTTTAGTGATCTATATTGAAGCAGCCTTTATTTATTGGATT 636
||||.|||||||||.|.||.|||||.|||||.||.||.||.||||||||.
BL01828___yck 587 TTGACCAAATTTTAATCATTTATATGGAAGCCGCATTCATCTATTGGATC 636
BSNT_00640___ 637 ATCTGCTTCCTGCTTTCACTCGTCCAGCATGTCATCGAACGGCGTCTTGA 686
||||||||..|.||..|.||.||.|||||....||.|||||||||.|.||
BL01828___yck 637 ATCTGCTTTGTTCTCGCGCTTGTTCAGCAGCAGATTGAACGGCGTTTGGA 686
BSNT_00640___ 687 CCGCTACGTGGCCAAATAA 705
|||.||.||||||||.|||
BL01828___yck 687 CCGGTATGTGGCCAAGTAA 705
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