Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00672 and BL01851

See Amino acid alignment / Visit BSNT_00672 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:18
# Commandline: needle
#    -asequence dna-align/BSNT_00672___yclM.1.5803.seq
#    -bsequence dna-align/BL01851___yclM.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00672___yclM-BL01851___yclM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00672___yclM-BL01851___yclM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00672___yclM
# 2: BL01851___yclM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1406
# Identity:    1009/1406 (71.8%)
# Similarity:  1009/1406 (71.8%)
# Gaps:          85/1406 ( 6.0%)
# Score: 3536.0
# 
#
#=======================================

BSNT_00672___      1 ATGAAGGTCGTTAAATTCGGAGGCAGCTCACTTGCTTCAGGCGCCCAGCT     50
                     |||||.|||||||||||.|||||||||||.||.||.|||||.||||||||
BL01851___ycl      1 ATGAAAGTCGTTAAATTTGGAGGCAGCTCGCTCGCATCAGGAGCCCAGCT     50

BSNT_00672___     51 TGACAAGGTGTTTCACATCGTTACCTCAGATCCGGCACGGAAAGCTGTAG    100
                     .||.||.||.|||||.|||||.||.||.|||||||.|.|||..||.||.|
BL01851___ycl     51 AGAGAAAGTATTTCAAATCGTCACTTCCGATCCGGAAAGGAGGGCCGTCG    100

BSNT_00672___    101 TCGTTTCAGCTCCGGGAAAACGCTATGCCGAGGATACGAAAGTGACTGAT    150
                     ||||.||.||.||.||||||||..||.||||||||||||||||.|||||.
BL01851___ycl    101 TCGTATCGGCACCCGGAAAACGGCATCCCGAGGATACGAAAGTAACTGAC    150

BSNT_00672___    151 CTCTTAATCGCATGTGCAGAACAATA-----TTTGGCAACAGGCAGTGCA    195
                     ||.|||||||.|||.||..||||.||     |.|.|.||.|.||    .|
BL01851___ycl    151 CTGTTAATCGAATGCGCCCAACAGTACCTATTATCGAAAGAAGC----GA    196

BSNT_00672___    196 CCTGAACTGGCGGAAGCAGTTGTGGAACGGTACGCTCTCATCGCCAATGA    245
                     || |..||||..||.||..||||.|.||||||.||....|||||      
BL01851___ycl    197 CC-GGCCTGGTTGAGGCGATTGTCGGACGGTATGCCGATATCGC------    239

BSNT_00672___    246 GCTTCAGCTGGGGCAAAGCATTATCGA-------AAAAATCAGAAAT---    285
                     |||..||||.||||      ||..|||       |..||.|.|  ||   
BL01851___ycl    240 GCTAGAGCTCGGGC------TTGCCGATGACGTGATCAACCGG--ATCCG    281

BSNT_00672___    286 ----GATCTGTTTACGCTTTTAGAAGGAGATAAAAGCAATCCCGAGCAAT    331
                         ||.|||.||..|||..|.|||||.|||||||..|||||.||.|..|
BL01851___ycl    282 GGCAGACCTGCTTCAGCTGCTCGAAGGTGATAAAACAAATCCGGAACGGT    331

BSNT_00672___    332 ACCTTGACGCAGTCAAGGCCAGCGGAGAGGATAACAATGCCAAGCTGATC    381
                     ...||||.||..||||.||.|||||.||.||||||||||||||.|||.|.
BL01851___ycl    332 TTATTGATGCGATCAAAGCTAGCGGCGAAGATAACAATGCCAAACTGGTA    381

BSNT_00672___    382 GCCGCTTACTT------CCGTTATAAAGGCGTCAAAGCGGAATATGTAAA    425
                     ||.||.|||||      ||||      ||.||..||||..|.|||||.|.
BL01851___ycl    382 GCGGCCTACTTCAGGCACCGT------GGAGTTGAAGCACATTATGTCAG    425

BSNT_00672___    426 CCCGAAGGATGCCGGCCTCTTTGTGACAAATGAACCCGGCAACGCGCAAG    475
                     .||.||.||.|||||.||.||.|||||.|..||||||||||||||.||||
BL01851___ycl    426 TCCAAAAGACGCCGGGCTGTTCGTGACGAGCGAACCCGGCAACGCACAAG    475

BSNT_00672___    476 TTCTTCCTGAATCCTATCAAAACCTCTATCGTCT---TCGGGAACGTGAC    522
                     |.||.||.||.|||||..|.||.||.|.||..||   .|.|.||    |.
BL01851___ycl    476 TGCTGCCCGAGTCCTACGACAATCTGTTTCAGCTCAGACAGCAA----AA    521

BSNT_00672___    523 GGAC-TCATCATTTTTCCCGGTTTTTTCGGATTCAGCAAGGATGGCGATG    571
                     ||.| ||||.||.||||||||.||.||||||||||||.||||.||.||.|
BL01851___ycl    522 GGGCATCATTATCTTTCCCGGCTTCTTCGGATTCAGCCAGGAAGGAGAAG    571

BSNT_00672___    572 TGATCACATTCTCACGGAGCGGTTCTGATATTACCGGTTCGATTCTTGCC    621
                     ||||.||.||.||.||.|||||.|||||.|||||.||.||.|||.|.||.
BL01851___ycl    572 TGATGACGTTTTCGCGCAGCGGCTCTGACATTACGGGCTCCATTTTAGCG    621

BSNT_00672___    622 AACGGACTACAAGCCGATTTGTACGAAAACTTTACAGACGTGGACGCTGT    671
                     ||.|||.|..|||||||.|||||.||||||||.||.|||||.|||||.||
BL01851___ycl    622 AATGGATTGAAAGCCGAGTTGTATGAAAACTTCACTGACGTTGACGCCGT    671

BSNT_00672___    672 GTATTCTGTCAATCCGTCCTTCGTTGAGAATCCA-----AAGGAAATCAG    716
                     .|||||||||||.|||.|..||||     |||||     ||.||||||.|
BL01851___ycl    672 TTATTCTGTCAACCCGGCGATCGT-----ATCCAACCCGAAAGAAATCCG    716

BSNT_00672___    717 CGAGCTGACATATAGAGAGATGCGGGAGCTGTCCTACGCGGGTTTTTCAG    766
                     ||||||||||||..|.||.|||.|.||||||||.||.||.||.|||||.|
BL01851___ycl    717 CGAGCTGACATACCGGGAAATGAGAGAGCTGTCGTATGCCGGCTTTTCCG    766

BSNT_00672___    767 TGTTTCATGATGAAGCGCTCATTCCGGCATTCAGAGCGGGGATTCCTGTT    816
                     |.||||||||||||||..|.||.||.||.|||.|.|||.|.||.||.|||
BL01851___ycl    767 TCTTTCATGATGAAGCATTGATCCCTGCTTTCCGGGCGCGCATACCGGTT    816

BSNT_00672___    817 CAGATCAAAAATACGAACAACCCCTCAGCCGAAGGCACCCGCGTCGTCAG    866
                     ||||||||||||||.||||||||....||.|||||.||..|.||.|||..
BL01851___ycl    817 CAGATCAAAAATACAAACAACCCGGACGCAGAAGGGACAAGAGTTGTCGC    866

BSNT_00672___    867 CAAGCGGGATAACACAAACGGGCCTGTCGTCGGCATTGCCAGCGACACCG    916
                     ||..||.||.|||||.|||||.|||||||||||.||.|||.||||||.||
BL01851___ycl    867 CACACGCGACAACACGAACGGACCTGTCGTCGGGATCGCCGGCGACAGCG    916

BSNT_00672___    917 GTTTTTGCAGCATTTATATCAGCAAGTATCTCATGAACAGAGAAATCGGT    966
                     |.||||||||||||||.||||||||.|||.|.||||||.||||||||||.
BL01851___ycl    917 GATTTTGCAGCATTTACATCAGCAAATATTTGATGAACCGAGAAATCGGC    966

BSNT_00672___    967 TTTGGCCGCAGAGCCCTTCACATCCTGGAGGAGCATGGTTTGACGTATGA   1016
                     ||.||||||.|.|.|||.||.|||||.||.||..|.||..||||.|||||
BL01851___ycl    967 TTCGGCCGCCGCGTCCTGCAAATCCTTGAAGATGAAGGGCTGACATATGA   1016

BSNT_00672___   1017 GCATGTTCCATCGGGAATCGATGACATGACAATCATTTTATGGCAGGGGC   1066
                     .||..||||.||.||.||.||.||.||.||.|||||||||.|||||...|
BL01851___ycl   1017 ACACATTCCGTCCGGCATTGACGATATTACGATCATTTTAAGGCAGAATC   1066

BSNT_00672___   1067 AAATGGAT---GCCGCCACTGAACGCAGCGTCATCAAACGGATCGAAGAG   1113
                     ||||||||   ||.||.....||||.|   |.||||||||||||.|.||.
BL01851___ycl   1067 AAATGGATCAAGCAGCAGAAAAACGGA---TGATCAAACGGATCAAGGAA   1113

BSNT_00672___   1114 GATTTGCATGCCGATGAAGTCATCG-TCGAGCATCATCTCGCCCTGATTA   1162
                     ||.|||.||||.|||||||| |.|| |.||.||..||.|.||||||||.|
BL01851___ycl   1114 GAGTTGGATGCTGATGAAGT-AGCGATTGAACACAATATTGCCCTGATCA   1162

BSNT_00672___   1163 TGGTTGTAGGGGAAGCGATGCGCCACAATGTCGGTACAACGGCAAGAGCC   1212
                     ||||.||.||.|||||.||||||||.||.|||||.||.|||||||||||.
BL01851___ycl   1163 TGGTCGTCGGCGAAGCCATGCGCCATAACGTCGGAACGACGGCAAGAGCG   1212

BSNT_00672___   1213 GCCAAAGCATTATCAGAGGCACAG-GTGAATATCGAAATGATCAATCAGG   1261
                     .|.||||||||.||.||.|| |.| ||.||.||||||||||||||.||||
BL01851___ycl   1213 TCAAAAGCATTGTCTGAAGC-CGGCGTCAACATCGAAATGATCAACCAGG   1261

BSNT_00672___   1262 GATCTTCTGAAGTGAGCATGATGTTTGGCGTAAAAGAAGCCGAAGAAAGA   1311
                     |.||.||.|||||.|||||||||||.|||||.||.|||||..|.||||.|
BL01851___ycl   1262 GCTCCTCGGAAGTCAGCATGATGTTCGGCGTTAAGGAAGCTCAGGAAAAA   1311

BSNT_00672___   1312 AAAGCCGTCCAAGCGTTATACCGGGAATTTTTCGCGGGCGTGCTGATCTC   1361
                     .||||.||||..||.|||||||.|||.||||||||....||     ||||
BL01851___ycl   1312 CAAGCGGTCCGCGCATTATACCAGGAGTTTTTCGCAAAAGT-----TCTC   1356

BSNT_00672___   1362 --TTAA   1365
                       ||||
BL01851___ycl   1357 GTTTAA   1362


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