Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00695 and BL01861

See Amino acid alignment / Visit BSNT_00695 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:20
# Commandline: needle
#    -asequence dna-align/BSNT_00695___ycnK.1.5803.seq
#    -bsequence dna-align/BL01861___ycnK.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00695___ycnK-BL01861___ycnK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00695___ycnK-BL01861___ycnK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00695___ycnK
# 2: BL01861___ycnK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 643
# Identity:     374/643 (58.2%)
# Similarity:   374/643 (58.2%)
# Gaps:         140/643 (21.8%)
# Score: 923.0
# 
#
#=======================================

BSNT_00695___      1 ATGCTTCCGATTAATAGACAGCAACACATACTGAAGTGGCTGAAAGAAGA     50
                     |||||.||||||||.|||..|.|.||.||..||...|||.|.||||||||
BL01861___ycn      1 ATGCTACCGATTAAAAGAAGGGAGCAGATTTTGGCTTGGATCAAAGAAGA     50

BSNT_00695___     51 AGGCTCGCTTAGAATTTCTGACATCAGCG-CAAGGTTCGGCGTTTCGGAA     99
                     ||..||.||..|.|||||.||.|| ..|| .||||.|...|||.||.|||
BL01861___ycn     51 AGAATCTCTGCGCATTTCGGAAAT-TTCGAAAAGGCTGAACGTCTCTGAA     99

BSNT_00695___    100 ATGACGGTATATAGAGATGTCAATCAGCTGGTTCAGTCAAA---TCAGGT    146
                     |||||.||.||..|.||..|.||.|.|||.|||.|   |||   .|||||
BL01861___ycn    100 ATGACCGTTTACCGCGACATTAAACCGCTCGTTGA---AAACGGGCAGGT    146

BSNT_00695___    147 CATAAAAACCGCCGGCGGCATCACGCTCCCCGTCCGAACACCTCAAA---    193
                     |||.||.|||||.|||||.||.|||||        .||||...|.||   
BL01861___ycn    147 CATCAAGACCGCAGGCGGAATTACGCT--------AAACAAGCCGAAGCA    188

BSNT_00695___    194 -CAGATCATATGTGCAGCTATTGCTT--------GAA----GCCAG--TC    228
                      |||.|    ||.|||||| ||||.|        |||    |.|||  ||
BL01861___ycn    189 GCAGCT----TGGGCAGCT-TTGCGTCGTTTGCGGAAAAGGGGCAGGTTC    233

BSNT_00695___    229 AATCAAGCTCATTCGGTTCAGCTGATTACGGTAAACCAAGAC------AT    272
                        .|.|||  |.|.||   ||..|||   ||.||..|.|||      ||
BL01861___ycn    234 ---GAGGCT--TGCCGT---GCAAATT---GTCAAAAACGACAGCCAAAT    272

BSNT_00695___    273 TGAACAGCTATGCTGCGCACATTGCGCGTTTTTGCGTTACGCGGA--TAA    320
                     |||||||.|.|||||||..||||||||..|..|.||.||.|.|.|  |.|
BL01861___ycn    273 TGAACAGTTTTGCTGCGTGCATTGCGCAATGCTCCGCTATGAGAAAGTGA    322

BSNT_00695___    321 AACGGAAGAGGTTTCACACTTGATTTGCAGAGATTTTCTGTTACAGACAA    370
                     ||  ||.||.||.|||||..|.||.|||||.||||||.||.|..|.||.|
BL01861___ycn    323 AA--GATGATGTATCACAGATTATCTGCAGGGATTTTTTGCTGGATACGA    370

BSNT_00695___    371 CCGTCAGTGCC---GGT-TCGGCTTATTTCGTCGTAAATGCTGA-----A    411
                     |..||||.|||   |.| .||.|||.||.|    |..||.|.||     |
BL01861___ycn    371 CGATCAGCGCCAAAGCTGCCGTCTTTTTGC----TGGATACAGATCTTCA    416

BSNT_00695___    412 TTGAACCTGCACTGCTGCCAGCCGCAGGC-CATTCCGTTTGCGACGCTCG    460
                     ||     ||.||||||||.|||||||.|| |  |||.|||    ||||  
BL01861___ycn    417 TT-----TGAACTGCTGCGAGCCGCATGCGC--TCCCTTT----CGCT--    453

BSNT_00695___    461 ATC--ATGCCGAA---CG---ATTTCAAAAAGGATTCGGCGG--CGCCGT    500
                      ||  |.||.|||   ||   |||..|||||||.||.|||||  .||.||
BL01861___ycn    454 -TCTGAAGCAGAAGCGCGGAAATTCAAAAAAGGCTTTGGCGGACAGCTGT    502

BSNT_00695___    501 ---------------CCGCACTT-TCGACCAAGCGCTGGAAGAC-ATGCT    533
                                    ||||.||| |.|.|||       |||.|| |||  
BL01861___ycn    503 TATCGTTTGACGATGCCGCGCTTCTGGTCCA-------GAAAACGATG--    543

BSNT_00695___    534 CAAAGACAGAAAGAAACGCTGCACCTGCACC---AAGAAATAA    573
                               |||||..||||   |||||.|   ||||.||.|
BL01861___ycn    544 ----------AAGAACAGCTG---CTGCAGCCTGAAGACATGA    573


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