Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_00897 and BL01869

See Amino acid alignment / Visit BSNT_00897 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:28
# Commandline: needle
#    -asequence dna-align/BSNT_00897___ydeI.1.5803.seq
#    -bsequence dna-align/BL01869.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00897___ydeI-BL01869.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00897___ydeI-BL01869.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00897___ydeI
# 2: BL01869
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 608
# Identity:     482/608 (79.3%)
# Similarity:   482/608 (79.3%)
# Gaps:          28/608 ( 4.6%)
# Score: 1928.0
# 
#
#=======================================

BSNT_00897___      1 ATGACAAATAGCAGAACGAATCCGAAGGTTGATGAATTTTTAAGTAAAGC     50
                     |||||||||||||||||||||||.||||||||||||||||||||.|||||
BL01869            1 ATGACAAATAGCAGAACGAATCCAAAGGTTGATGAATTTTTAAGCAAAGC     50

BSNT_00897___     51 GAAAAAGTGGAAGGAAGAATTTGAGAAGTTGAGAACC-----ATCATTCT     95
                     ..||||||||||||||||||||.|||||.|     ||     |||.|.||
BL01869           51 CGAAAAGTGGAAGGAAGAATTTAAGAAGCT-----CCGTCAAATCGTACT     95

BSNT_00897___     96 TGACTGTGAGCTGACTGAAGATTTTAAGTGGATGCATCCTTGTTACACAT    145
                     |||.||||||||||..||||||||.|||||||.||||||||||||.||.|
BL01869           96 TGAATGTGAGCTGAACGAAGATTTCAAGTGGAAGCATCCTTGTTATACGT    145

BSNT_00897___    146 ACAATAATAAAAATGTCGTTTTAATACATGGGTTTAAAGAATATTGTGCG    195
                     .|.|.||||||||..||||||||||.|||||.|||||.||||||||||||
BL01869          146 TCGAGAATAAAAACATCGTTTTAATCCATGGATTTAAGGAATATTGTGCG    195

BSNT_00897___    196 CTTCTGTTTCACAAAGGTGCCCTATTACAGGATACCGATGGAATTCTCAT    245
                     |||.|||||||.|||||.||..|.|||.||||..||.|.||.|||||.||
BL01869          196 CTTTTGTTTCATAAAGGCGCATTGTTAAAGGACCCCAACGGGATTCTTAT    245

BSNT_00897___    246 TCAACAAACGGAGAATGTACAGGCGGCGCGCCAGATTCGGTTTACAACTG    295
                     .||.|||||||||||||||||.||.|||||.|||.||||.||.||.|.||
BL01869          246 CCAGCAAACGGAGAATGTACAAGCCGCGCGGCAGGTTCGATTCACCAATG    295

BSNT_00897___    296 TTCAGGAAATAAATGAGCTAGAAAACATTTTGAAAGCCTATATTCACGAA    345
                     |.||.||||||..|||..|.||.|.||||||||||||.|||||..|.||.
BL01869          296 TACAAGAAATAGCTGAAATGGAGACCATTTTGAAAGCTTATATAAATGAG    345

BSNT_00897___    346 GCCATTGAAGTTGAAAAAGCCGGTTTGAAAGTGGAAGTT-AACA------    388
                     ||||||||.||.|||||||||||..||.|||||||..|| ||||      
BL01869          346 GCCATTGATGTAGAAAAAGCCGGCCTGCAAGTGGATTTTAAACAGGCTGC    395

BSNT_00897___    389 AAAATATTGAATTGAAC-ATTCCTGAAGAACTTCAAAATAAATTCGATGA    437
                     |.|||||        || |||||.||||||||||||||.|||||||.|||
BL01869          396 AGAATAT--------ACAATTCCAGAAGAACTTCAAAAAAAATTCGCTGA    437

BSNT_00897___    438 AATCCCTGCATTGAAAATTGCTTTTGAAGCTTTGACCCCGGGACGGCAAA    487
                     ||||||.||.||.|||...|||||||||||.|||||.|||||.|||||||
BL01869          438 AATCCCAGCTTTAAAAGCGGCTTTTGAAGCATTGACGCCGGGCCGGCAAA    487

BSNT_00897___    488 GAGCGTACACTCTTTATTTTTCTCAAGCC-AAACAATCCAAAACCCGAGA    536
                     ||||.||.|.|||||||||||| |||.|| |||||||||||||||.||||
BL01869          488 GAGCATATATTCTTTATTTTTC-CAAACCAAAACAATCCAAAACCAGAGA    536

BSNT_00897___    537 ATCGAGAGTCGAAAAATATGTGCAAAAAATTCTCGATGGAAAGGGATTAA    586
                     .|||.|..|.|||||||||...||..||||||||||||||||||||||.|
BL01869          537 GTCGCGGATTGAAAAATATACTCAGCAAATTCTCGATGGAAAGGGATTGA    586

BSNT_00897___    587 AGGATTAG    594
                     |.||.|||
BL01869          587 ATGACTAG    594


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.