Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06073 and BL01925

See Amino acid alignment / Visit BSNT_06073 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:04
# Commandline: needle
#    -asequence dna-align/BSNT_06073___yxeC.1.5803.seq
#    -bsequence dna-align/BL01925.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06073___yxeC-BL01925.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06073___yxeC-BL01925.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06073___yxeC
# 2: BL01925
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 726
# Identity:     263/726 (36.2%)
# Similarity:   263/726 (36.2%)
# Gaps:         387/726 (53.3%)
# Score: 498.0
# 
#
#=======================================

BSNT_06073___      1 -------ATGGGAATTACAAAAAGAG-GTGCCGCTTGGGAATG---GCTG     39
                            ||||..||..|||.|||.| ||        |.||||   ||||
BL01925            1 ATGGCTAATGGATATACCAATAAGGGAGT--------GAAATGGGAGCTG     42

BSNT_06073___     40 --------CATAGCTGGTGGATGCTGTTTATTTTCATGCCTTTTGCCATT     81
                             ||||     |||.|.||.|||.|.||.|..|||||||.|   
BL01925           43 TTTCAATCCATA-----TGGGTCCTATTTGTATTTACTCCTTTTGGC---     84

BSNT_06073___     82 ACCAGTTTTT--------TTGCCTTTTTATTTATT--------GGCATCA    115
                          |||||        ||.|.|||||.|.||||        ||||   
BL01925           85 -----TTTTTAAATTGGGTTTCTTTTTTCTATATTTTCGCTCGGGCA---    126

BSNT_06073___    116 AGGTTAGAAATAGAAAGTGGATCAT----GTACGGCATC-ATT----TAT    156
                          |.|.|.|.|||.|||.|.||    |.|.|| ||| |||    |||
BL01925          127 -----AAACAAAAAAAATGGTTAATTGCCGGATGG-ATCTATTTTGCTAT    170

BSNT_06073___    157 TTTTTCATT---TTTGCGTT----TGG-----TTTTGTTTTGTCCGATCT    194
                     |||||.|||   |.|.|.||    |||     .|||.||     |.||..
BL01925          171 TTTTTTATTCACTATTCTTTCTAATGGAACACCTTTATT-----CAATGC    215

BSNT_06073___    195 GCCC---GGTGTTTTTATTGTGGTCCCGTTATGGGCGGTAACCATTATTC    241
                     |.||   |.|.||||.||..|.|.|      ||||..||..|.|||.|||
BL01925          216 GGCCATGGTTCTTTTGATCATCGGC------TGGGGTGTCTCAATTGTTC    259

BSNT_06073___    242 ATGGATTTAAAGTGCGCCCGCTGTATTTGATTCAGCTGGATGTC--TACA    289
                     |.|..||.||||||||.|||..||.|||.||||.|.|.|| |||  |.||
BL01925          260 ACGCTTTAAAAGTGCGGCCGGAGTTTTTAATTCGGTTAGA-GTCCATTCA    308

BSNT_06073___    290 A--------------------AGATCATGTG-------------------    300
                     |                    ||||||..||                   
BL01925          309 ACAGTTGAAACGCGCTGAAATAGATCAGCTGCGTAAATCTCTGAAAAATG    358

BSNT_06073___    301 --------GAGGCGCG----GGCTTTTGC---CGAGGCA-----------    324
                             |||.| ||    ||||    |   ||||.||           
BL01925          359 AGTATCCAGAGAC-CGCCGCGGCT----CGAACGAGCCAAACCGATAAAC    403

BSNT_06073___    325 ----------------AGA----AGTGAAGCCGAGAG-------CA----    343
                                     |||    |.|.||| ||||.|       ||    
BL01925          404 AATCGGAACGGAAAATAGACATTAATCAAG-CGAGTGTGGAAGACATCGC    452

BSNT_06073___    344 ---GATTTCATGCA-----------------CCGAAACAG----------    363
                        ||||.|  |||                 ||.|||.||          
BL01925          453 TTCGATTCC--GCAGTTGGGAATTATCCTCGCCAAAAAAGCGGTCGCCAT    500

BSNT_06073___    364 -------------------------TCTATTCAGGATATACATATTC-GC    387
                                              ||||||   |||   ||| ||| ||
BL01925          501 GCGTGAAGAAATCGGTGGCTTTTCATCTATT---GAT---CAT-TTCGGC    543

BSNT_06073___    388 AAAGAACAGTAA--------------------------------------    399
                        |||||||.|                                      
BL01925          544 ---GAACAGTTAGGATTGAAGCCGCATGTGCTTTTGAAGGTAGAGCCGTA    590

BSNT_06073___    399 --------------------------------------------------    399
                                                                       
BL01925          591 TCTCTCATTCTCTAAACCAGTTGACCGAAGGGATAGAAAAGATGAGAATG    640

BSNT_06073___    399 --------------------------    399
                                               
BL01925          641 CTGAAGGAAGGGTTTTGGATATTTAA    666


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