Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03070 and BL01969

See Amino acid alignment / Visit BSNT_03070 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:46
# Commandline: needle
#    -asequence dna-align/BSNT_03070___yoxD.1.5803.seq
#    -bsequence dna-align/BL01969___fabG.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03070___yoxD-BL01969___fabG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03070___yoxD-BL01969___fabG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03070___yoxD
# 2: BL01969___fabG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 734
# Identity:     539/734 (73.4%)
# Similarity:   539/734 (73.4%)
# Gaps:          34/734 ( 4.6%)
# Score: 1958.0
# 
#
#=======================================

BSNT_03070___      1 TTGCAAAGTTTACAACATAAAACTGCACTAATCACAGGCGGAGGCAGAGG     50
                     .|||||...||||||.|.|||||.||.||.||.|||||.||.||.|||||
BL01969___fab      1 ATGCAATCCTTACAAAACAAAACCGCTCTGATTACAGGAGGGGGAAGAGG     50

BSNT_03070___     51 AATTGGCCGTGCTACAGCTCTTGCTCTTGCGAAAGAAGGCGTAAATATTG    100
                     |||.|||||.||.|||||..||||.||.||.||||||||||||.||||.|
BL01969___fab     51 AATCGGCCGCGCCACAGCGATTGCCCTCGCAAAAGAAGGCGTACATATCG    100

BSNT_03070___    101 GGTTAATCGGCCGGACTGCCGCTAATGTTGAAAAAGTGGCAGAAGAAGTC    150
                     |..|.||||||||.||.||.||.|||.|||||||||.||||||.|||.|.
BL01969___fab    101 GCCTTATCGGCCGTACAGCTGCGAATCTTGAAAAAGCGGCAGAGGAATTG    150

BSNT_03070___    151 AAAGCGCTTGGTGTAAAAG---CTGCATTTGCTGCTGCAGATGTAAAAGA    197
                     ||.|||.|.||||||||||   |||   |.||.||.||.||.|||||.||
BL01969___fab    151 AAGGCGTTCGGTGTAAAAGTATCTG---TAGCCGCAGCTGACGTAAAGGA    197

BSNT_03070___    198 T------GC-------CGAGCAGGTTAACCAAGCCGTCGCTCAAGTGAAA    234
                     |      ||       ||.||||    .||||.|||||         |||
BL01969___fab    198 TTTAACAGCTGTAGAACGTGCAG----TCCAATCCGTC---------AAA    234

BSNT_03070___    235 GAACAGCTTGGTGATATCGATATTCTCATTAATAACGCGGGAATCAGCAA    284
                     |||.|||||||..|.|||||||||||||||||.||.||.||.|||.||..
BL01969___fab    235 GAAGAGCTTGGACAAATCGATATTCTCATTAACAATGCCGGGATCGGCGG    284

BSNT_03070___    285 ATTTGGCGG-TTTCTTAGATCTGTCAGCCGATGAATGGGAAAATATTATA    333
                     .||||..|| |||||| ||.|..||..||||.|||||||||||||||||.
BL01969___fab    285 GTTTGCAGGATTTCTT-GAGCAATCTCCCGAAGAATGGGAAAATATTATC    333

BSNT_03070___    334 CAAGTCAACCTAATGGGTGTGTATCATGTGACTCGCGCGGTGCTTCCGGA    383
                     ||.||.||.||.|||||.||.||..||||.||.|||||.||.||.||.||
BL01969___fab    334 CAGGTTAATCTGATGGGGGTTTACAATGTAACACGCGCCGTTCTGCCTGA    383

BSNT_03070___    384 AATGATCGAACGCAAAGCCGGAGATATCATTAATATTTCGTCTACAGCGG    433
                     ||||||.|||.|.||||||||.|||||||||||||||||.||||||||.|
BL01969___fab    384 AATGATTGAAAGAAAAGCCGGCGATATCATTAATATTTCTTCTACAGCCG    433

BSNT_03070___    434 GCCAAAGAGGAGCTGCTGTAACAAGTGCTTATAGCGCTTCTAAATTTGCC    483
                     |||||||.|||||.||.|..|||||.||.||.||.||.|||||.||.||.
BL01969___fab    434 GCCAAAGGGGAGCAGCCGGCACAAGCGCCTACAGTGCGTCTAAGTTCGCT    483

BSNT_03070___    484 GTTCTAGGGTTAACAGAGTCTCTTATGCAAGAAGTGAGAAAACATAATAT    533
                     ||.||.|||.|.||.||.||.||.|||||.|||||.|||||.||.|||||
BL01969___fab    484 GTGCTCGGGCTGACCGAATCGCTGATGCAGGAAGTCAGAAAGCACAATAT    533

BSNT_03070___    534 CAGAGTCAGCGCGTTAACGCCGAGCACTGTCGCTAGTGATATGTCTATCG    583
                     |.|.||.|||||..|.||.||.|||||.||.||.|..|||.||.|.||||
BL01969___fab    534 CCGCGTGAGCGCCCTTACACCAAGCACGGTTGCGACGGATTTGGCAATCG    583

BSNT_03070___    584 AATTGAACTTAACAGACGGTAATCCTGAAAAAGTTATGCAGCCTGAGGAT    633
                     |.|..||.||.||||||||.|||||.|||...||.|||||||||||.|||
BL01969___fab    584 ACTCAAAATTGACAGACGGCAATCCGGAACGCGTCATGCAGCCTGAAGAT    633

BSNT_03070___    634 CTTGCTGAGTACATGGTGGCACAATTGAAATTAGATCCTCGTATTTTCAT    683
                     ||.||.||.||||||||.||.||..|.|||.|..||||.||.||||||||
BL01969___fab    634 CTGGCGGAATACATGGTTGCCCAGCTCAAACTGCATCCGCGCATTTTCAT    683

BSNT_03070___    684 CAAAACAGCGGGATTATGGTCAACAAATCCTTAA    717
                     .|||.||||.||..|.|||||.||||||||||||
BL01969___fab    684 TAAATCAGCCGGCATGTGGTCTACAAATCCTTAA    717


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