Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02249 and BL01975
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:45
# Commandline: needle
# -asequence dna-align/BSNT_02249___ykoT.1.5803.seq
# -bsequence dna-align/BL01975.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02249___ykoT-BL01975.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02249___ykoT-BL01975.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02249___ykoT
# 2: BL01975
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1039
# Identity: 758/1039 (73.0%)
# Similarity: 758/1039 (73.0%)
# Gaps: 56/1039 ( 5.4%)
# Score: 2643.5
#
#
#=======================================
BSNT_02249___ 1 TTGAAACAGTC-ACAGCCAGTATTAACCATCGTCGTCCCGTGTTTCAATG 49
|||||.| .|| ||||||..|..|.||.||||||||.||.||||..||.|
BL01975 1 TTGAATC-TTCAACAGCCTTTGCTGACGATCGTCGTACCCTGTTATAACG 49
BSNT_02249___ 50 AAGAGGAAGTGTTTCAAGAAAC-----AAGCCGTCAGCTGACAGAGGTTG 94
|||||||.||||||...||||| || ||||||||.|.|||..
BL01975 50 AAGAGGACGTGTTTGCCGAAACCGCAAAA-----CAGCTGACTGCGGTAT 94
BSNT_02249___ 95 TAGATGATTTAATTGAAGAAAAATTAATTGCTGAAGACAGTAAAATTCTG 144
|.||||||.|.|..|.|||.|||.|.|||.||..|||.||.||..||.|.
BL01975 95 TGGATGATCTCACAGCAGATAAACTGATTTCTTCAGAGAGCAAGCTTTTA 144
BSNT_02249___ 145 TTTGTCGATGATGGCAGC-AAAGACCGCACTTGGGCTTTGATTGCTATGG 193
|||||||||||||| |.| |.|||||||||.|||.|..|||||||.||||
BL01975 145 TTTGTCGATGATGG-ATCGACAGACCGCACATGGCCGCTGATTGCCATGG 193
BSNT_02249___ 194 AGAGCATAAGAAACAAGAAGGTTACCGGCTTAAAATTAGCCTGCAATGTC 243
|.||||.||.||||....|.||.||.|||||.||..|.|||.|.||| ||
BL01975 194 AAAGCACAAAAAACCGCTATGTGACAGGCTTGAAGCTGGCCCGTAAT-TC 242
BSNT_02249___ 244 -GGCCACCAAAAAGCGCTTTTAGCCGGACTGCATAAAGCGAAGAATAGGT 292
||.||.||||||||.||.|||||||||||..|||||||.|||.|.|..|
BL01975 243 GGGACATCAAAAAGCTCTGTTAGCCGGACTCGATAAAGCAAAGCAAAAAT 292
BSNT_02249___ 293 CAGACTGCGTCATTTCGATCGATGCCGATCTTCAGGACGATATCTCTGTG 342
|.||.|||||.|||||.||||||||||||||||||||.||.||.||.|.|
BL01975 293 CCGATTGCGTTATTTCAATCGATGCCGATCTTCAGGATGACATTTCGGCG 342
BSNT_02249___ 343 AT---CCGGGATTTTATGCTGAAATATCATAAGGGCTGCGAGATCGTTTA 389
|| |||| |||||....|||||||||.|.||||..||.|||||.||
BL01975 343 ATTCGCCGG---TTTATCGAAAAATATCATGAAGGCTATGAAATCGTCTA 389
BSNT_02249___ 390 CGGTGTACGCCGGAGCAGAAAAACCGATACCTTTTTCAAGCGCACGACAG 439
||||||||||||.|||.|..||||.|||||.|..||.||.||.|||||||
BL01975 390 CGGTGTACGCCGAAGCCGCCAAACGGATACATGGTTTAAACGAACGACAG 439
BSNT_02249___ 440 CGTTAGGGTTTTATCGTC----TCATGAATAAGCTTGGGATTAAATTAAT 485
|...|.||||.|| | ||||||||||||||||.||..|..|..|
BL01975 440 CCGGATGGTTCTA----CAAGATCATGAATAAGCTTGGCATCCAGCTGGT 485
BSNT_02249___ 486 TTATAATCATGCTGATTTTCG---TTTAATGAATAAAAGGTCCCTTGAAG 532
..||||.|||||.||.||||| |||| ||||||.||.|.|||||.|
BL01975 486 CGATAACCATGCCGACTTTCGGCTTTTA---AATAAACGGGCGCTTGAGG 532
BSNT_02249___ 533 AGCTTGAG-CGTTATCCGGAAGCGAATCTGTTTT--TAAGAGGTATTGTC 579
||| |.|| ||.|||.|.|||||.|| |||||| |..|.|||.|.||.
BL01975 533 AGC-TCAGCCGCTATGCAGAAGCAAA--TGTTTTCCTGCGCGGTTTGGTG 579
BSNT_02249___ 580 CCCATGATCGGCTTTAAATCGGCCGAAGTTTTGTATGACCGCAAGGAACG 629
|||.||||||||.||...|||||..||||.|..||||||||.||.||.||
BL01975 580 CCCCTGATCGGCCTTCGGTCGGCAAAAGTGTACTATGACCGAAAAGAGCG 629
BSNT_02249___ 630 CTTTGCCGGCAAAACGAAATATCCGCTGAAAAAGATGCTATCCTTCGCTT 679
..|.||.||..||||||||||||||||||||||.|||||.||.|||||||
BL01975 630 GATGGCTGGAGAAACGAAATATCCGCTGAAAAAAATGCTGTCTTTCGCTT 679
BSNT_02249___ 680 TTAACGGGATTACTTCATTCAGTGTCGCACCAATTCGATTCTTTACGCTT 729
||.||||||||||.||.|||||||||||.||.||.|||||.|||||.||.
BL01975 680 TTCACGGGATTACGTCTTTCAGTGTCGCTCCGATCCGATTTTTTACCCTG 729
BSNT_02249___ 730 TTAGGGTTTGTTTTGTTTTTCCTCAGCGCTG--TGGCAGGGATTGGCGCG 777
.|.||.||..|.||.||||||||.| |||| |.||.||.|||...||.
BL01975 730 ATTGGCTTCTTCTTATTTTTCCTAA--GCTGCATCGCGGGTATTTATGCA 777
BSNT_02249___ 778 TTTATTCAAAAGCTGCTCGGCCATACGAATGCAGGCTGGGCGTCTCTTAT 827
.|.||||||||.||||||||..|||||||||||||||||||.||.||.||
BL01975 778 ATGATTCAAAAACTGCTCGGGTATACGAATGCAGGCTGGGCTTCGCTGAT 827
BSNT_02249___ 828 CATATCCATTTGGTTTTTGGGCGGGCTGCAATTGATGGGAATTGGAATCA 877
|||.||.||.||||||||||||||.||||||||||||||.||.||.||.|
BL01975 828 CATTTCGATATGGTTTTTGGGCGGTCTGCAATTGATGGGGATCGGCATTA 877
BSNT_02249___ 878 TCGGAGAGTATATTGGAACGATTTTTTCTGAAGTGAAAAGACGGCCGAAA 927
||||.||.|||||.|||||||||||..|.||||||||||||.||||||.|
BL01975 878 TCGGCGAATATATCGGAACGATTTTCACCGAAGTGAAAAGAAGGCCGAGA 927
BSNT_02249___ 928 TACGCGATTGATATTGATTTGTATAATGAACAGCTGAGCCCGCTTCAGCG 977
||.|||.|.|||||.||||||||||.|||||.|||..|||.|| |||
BL01975 928 TATGCGGTGGATATCGATTTGTATACTGAACGGCTCGGCCGGC----GCG 973
BSNT_02249___ 978 --CCAGGAAAAAGAGCGGTTAGAAAAAAAGTACAGTTAA 1014
||.|.|||| |||...||||..|||..|||.|.|
BL01975 974 AACCTGAAAAA----CGGCCGGAAACGAAGCTCAGCTGA 1008
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